Gene Information

Name : Syn6312_1760 (Syn6312_1760)
Accession : YP_007061452.1
Strain : Synechococcus sp. PCC 6312
Genome accession: NC_019680
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1752464 - 1752805 bp
Length : 342 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
ATGGCAATTGCAGTTGGAATGATTGAAACCTTGGGTTTTCCCGCCGTAGTCGAAGCCGCTGATGCAATGGTGAAGGCTGC
CCGTGTCACTCTGGTTGGCTATGAAAAAATCGGCAGTGGTCGGGTGACGGTGATTGTGCGGGGCGATGTCTCGGAAGTCC
AGGCCTCAGTCGCAGCCGGTATCGAAAACGTCAAACGAGTTAATGGTGGTCAAGTGCTTTCAACCCACATCATCGCTCGT
CCCCATGAGAACTTGGAATACGTCTTGCCCATTCGCTACACCGAAGCGGTTGAACAGTTCCGGGAAAGTGTTAGCGGTAT
TCGTCCCCTAGGCCGGCCATAA

Protein sequence : 
MAIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGIENVKRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEAVEQFRESVSGIRPLGRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-17 53
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 6e-16 52
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-16 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syn6312_1760 YP_007061452.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 2e-17 53
Syn6312_1760 YP_007061452.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 3e-16 52
Syn6312_1760 YP_007061452.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 1e-16 49