Gene Information

Name : Cal7507_4133 (Cal7507_4133)
Accession : YP_007067347.1
Strain : Calothrix sp. PCC 7507
Genome accession: NC_019682
Putative virulence/resistance : Virulence
Product : cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.43
Position : 4684903 - 4687848 bp
Length : 2946 bp
Strand : +
Note : PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; Cyclic nucleotide-binding domain; TIGRFAM: type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-termin

DNA sequence :
ATGAGCGCCCATGCTATGACATCCCCAACGATTGATATCAAAGAATTTATTGCAGGGCTATTTCCTTTCAATCGCTTATC
AGCGAAAGTCTTAGAAAAACTATCTGCAAAAATTCAAGTTTTCCGTTATCGCATGGGGCAATTAATCATGGCACGGGAAA
CCATGCCCCAACAAATAAGTATTATCTATCAAGGACAAGCACGTCTTTTAGTCTTTGATTCTCGCACAGAAAAAAGCGTG
ACATTAAAGTTACTTGCTGCTGGAGAAATTTTAGGTTGGGTTTCCCATGTGCGGGGTATGGCTTGTGAAACTGTAGTTGC
TTCAACTGAGGTTGTTTGTCTCAACTTTGAGATTACAGATTTTCTGAGTCTAATGCATCAAGAAGCTGCTTTTGCAGAAG
CACTACACAGTCAAGCTACATTAATAGAAATATATGATTTATTAACAGCAGAATTTCACCGTCGAGCAGATGGTCATACT
GATTTAATCAAACTAGCCCATACTTGTTTTGAGCAAGCTACTATCTTATCTTCCCATTTAGAAAATATATATTCAAAGCA
GTTAAATGCTGATTTTTTGTGGTTAGTTAGCAGTAGTTCCCAACCAGATTTTCCCGTTGGTAGTCGTTTTGATGCAAAAT
TCCGCGTCTCTACAAATGTGAATCTGCGGTTGTTGGGTTTACCTCAATCATTACTGCAAACAGCACTAGTTCCCACATTC
AGCCAGACACTTGATGTTGCAGATATCCCCTACGCGCCAAAATTTAACCCACAACCAGAATTAGTCCAGGATTCTCAACC
CAGAAAATACCCATACATCCGGGGTAGAGGACAACAAGATGCAGCATTAGCTTGTTTCCAAATGTTGAGTCAATATTTTA
ATGTTACTTTCCGTAGAGATATGCTGCGGCGGGTGATATCGACAAATTATGAAAAGACTGGCGGGTTATCTCTGCCATTT
TGTGCTGCTGTGGCGGAGTTGTTGGGTTTAACAACGCAGATGGTAAGAGTTCCCGCTACTGCGGTGGTGCGCTTGCAATT
CCCTGTGATGATATCTTGGCAAGATAGTTTTGCGATTATCTACAAAAATAGCAACCAACAGTTACTCATTGCTGTTCCCG
AAATGGGATTGATACGTCGTAAAGTAAAAGACTTTGCGGAAACTTGGGGTAGTGAGGGCGAGGTGTTGTTACTCCAAGCC
AACAAACATACTCCCAAATCGCGGTTTGGGTTGAGTTGGTTCGTTCCGTCACTGCGACGCTACCGCAAGGTGTTAATTGA
GGTGCTGATTGCTTCAATGGTGGTGCAGATATTTGGGTTAGTTAATCCTTTGGTGACACAGGTTGTGATTGATAAAGTGA
TTATCGGTAACAGTCCTGATACTTTAGAGGTGTTTGGGATATTTTTAATTGTGGTGTCGATAGTGGAAGCTGTACTCACC
GCTATCCGCACGCAATTATTTGTAGATACCACTAACCGCATTGACCTTTCTTTAGGTTCAGAGGTGATTAATCACCTGCT
ACGTCTACCTTTATCTTACTTTGAACGTCGCCCTGTAGGAGAATTAGCCACGCGGGTTGGGGAACTGGAAAATATTCGTT
CCTTTCTCACGGGTACTGCGCTCACCGTAGTGATGGATGCGATATTTTCGGTAGTATATATCCTGGTGATGACAGTATAT
AGCCCGTTGCTGACTGTGGTGGGATTAGCAACAGTACCGTTATTTGCTTTGCTAAATTTGTTGGTTTCCCCGGTGATGCG
GCGACAGTTACAAGCGAAAGCCGAACGCAACGCCGAAACTCACTCCTACTTGGTGGAAATCATGGGAGGGATGCAGACAG
TTAAAGCACAAAATTTAGAAATGCGATCGCGTTGGCAATGGCAAGAACGGTATGCTCGTTATATTAGTGCTGGTTTCAAG
ACTGTCTCTACTCAAACTACCGCTAGTTCCGTCAGCAGTTTTCTCAACAAGTTCTCTAGCTTATTAGTGCTGTGGGTTGG
CGCTTACCTGGTTCTCCACCAACAACTCACCCTAGGACAACTAATGGCTTTTCGCATCCTCTCAGGCTATGTTACCAGTC
CTCTGTTGCGCCTGGTGCAGCTTTGGCAGAACTTCCAAGAGACAGCATTATCTCTACAACGTCTCAGCGATATTATCGAT
AGCCCCCAAGAAACGGAAGCTGATACTCAAAATATCTTGATGCCAACAATTACAGGTAGTGTTCGTTATGAAAATCTATC
TTTCAGCTTCCAACAAAATGGTCAACTGCAACTATGCAATATTAACTTAGATATCCCCACTGGTAGCTTTGTGGGCATAG
TTGGTCAAAGTGGTTCTGGTAAAAGTACCCTGCTGAAATTGTTACCCCGACTCTACGAACCCAAATCAGGAAAAATTGTG
ATTGATGGTTACGACATCAGCAAAGTAGAACTGTATTCCTTGCGTCGTCAGATTGGGATGGTGCTACAAGATACACTATT
ATTCGATGGTACGGTGCGGGAAAATATCGCCTTAGCTTCTCCTGATGCGGGTGATGAAGAAATCGTCACTGCTGCCAAAA
TTGCCTATGCCCATGACTTTATTATGAGCCTGCCCAACGGCTATAATACCCAGGTAGGGGAGAGAGGATCAGGATTGTCT
GGTGGACAGAGACAAAGAATTGCGATCGCTCGTACAGTCCTCCAAAATCCCCAAATCCTTGTCCTTGATGAAGCCACCAG
CGCCCTCGACTACAACGCTGAAGCCCAAGTTTGTCGCAATTTGGCAGAAGCATTTCATCAAAAAACAGTATTTTTCATCA
CCCACCGCCTCAGCACAATCCGCAACGCCGATATCATTCTGATGATGGATTCTGGCTCAATTGTCGAACAAGGAACCCAC
GCAGAATTAATGTCTCTTAAAGGCTATTACTACTGTCTCTATCAACAACAAGACGGACAGATTTAA

Protein sequence :
MSAHAMTSPTIDIKEFIAGLFPFNRLSAKVLEKLSAKIQVFRYRMGQLIMARETMPQQISIIYQGQARLLVFDSRTEKSV
TLKLLAAGEILGWVSHVRGMACETVVASTEVVCLNFEITDFLSLMHQEAAFAEALHSQATLIEIYDLLTAEFHRRADGHT
DLIKLAHTCFEQATILSSHLENIYSKQLNADFLWLVSSSSQPDFPVGSRFDAKFRVSTNVNLRLLGLPQSLLQTALVPTF
SQTLDVADIPYAPKFNPQPELVQDSQPRKYPYIRGRGQQDAALACFQMLSQYFNVTFRRDMLRRVISTNYEKTGGLSLPF
CAAVAELLGLTTQMVRVPATAVVRLQFPVMISWQDSFAIIYKNSNQQLLIAVPEMGLIRRKVKDFAETWGSEGEVLLLQA
NKHTPKSRFGLSWFVPSLRRYRKVLIEVLIASMVVQIFGLVNPLVTQVVIDKVIIGNSPDTLEVFGIFLIVVSIVEAVLT
AIRTQLFVDTTNRIDLSLGSEVINHLLRLPLSYFERRPVGELATRVGELENIRSFLTGTALTVVMDAIFSVVYILVMTVY
SPLLTVVGLATVPLFALLNLLVSPVMRRQLQAKAERNAETHSYLVEIMGGMQTVKAQNLEMRSRWQWQERYARYISAGFK
TVSTQTTASSVSSFLNKFSSLLVLWVGAYLVLHQQLTLGQLMAFRILSGYVTSPLLRLVQLWQNFQETALSLQRLSDIID
SPQETEADTQNILMPTITGSVRYENLSFSFQQNGQLQLCNINLDIPTGSFVGIVGQSGSGKSTLLKLLPRLYEPKSGKIV
IDGYDISKVELYSLRRQIGMVLQDTLLFDGTVRENIALASPDAGDEEIVTAAKIAYAHDFIMSLPNGYNTQVGERGSGLS
GGQRQRIAIARTVLQNPQILVLDEATSALDYNAEAQVCRNLAEAFHQKTVFFITHRLSTIRNADIILMMDSGSIVEQGTH
AELMSLKGYYYCLYQQQDGQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 3e-109 41
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 3e-109 41
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 3e-109 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal7507_4133 YP_007067347.1 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter VFG1269 Protein 2e-121 41
Cal7507_4133 YP_007067347.1 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter VFG0907 Protein 1e-109 41
Cal7507_4133 YP_007067347.1 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter VFG1557 Protein 2e-109 41
Cal7507_4133 YP_007067347.1 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter VFG1501 Protein 2e-109 41