Gene Information

Name : Lepto7376_0173 (Lepto7376_0173)
Accession : YP_007069452.1
Strain : Leptolyngbya sp. PCC 7376
Genome accession: NC_019683
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 200278 - 200589 bp
Length : 312 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: syp:SYNPCC7002_A1803 carbon dioxide concentrating mechanism protein; PFAM: Microcompartment protein, bacteria; SPTR: Carbon dioxide

DNA sequence : 
ATGCCTATTGCAGTTGGAATGATTGAGACCCGTGGTTTTCCCGCCGTTGTGGAAGCTGCCGATGCGATGGTCAAAGCCGC
TCGCGTAACATTGGTTGGTTACGAGAAAATTGGTAGCGGTCGTGTAACCGTTATCGTCCGTGGTGACGTATCTGAAGTAC
AAGCTTCTGTCTCCGCTGGTGTCGAGAACGCAAATCGCGTCAATGGTGGTGAAGTGCTTTCCACTCACATCATTGCTCGT
CCCCACGAAAACCTCGAATACGTTCTACCGATTCGCTACACCGAAGAAGTCGAACAATTCCGTACTTACTAA

Protein sequence : 
MPIAVGMIETRGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGVENANRVNGGEVLSTHIIAR
PHENLEYVLPIRYTEEVEQFRTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-18 56
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-17 54
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-17 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lepto7376_0173 YP_007069452.1 microcompartments protein VFG1596 Protein 2e-18 56
Lepto7376_0173 YP_007069452.1 microcompartments protein VFG1598 Protein 1e-17 54
Lepto7376_0173 YP_007069452.1 microcompartments protein VFG1597 Protein 5e-18 53