Gene Information

Name : Lepto7376_0174 (Lepto7376_0174)
Accession : YP_007069453.1
Strain : Leptolyngbya sp. PCC 7376
Genome accession: NC_019683
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 200729 - 201067 bp
Length : 339 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: syp:SYNPCC7002_A1802 carbon dioxide concentrating mechanism protein; PFAM: Microcompartment protein, bacteria; SPTR: Carbon dioxide

DNA sequence : 
ATGTCTATCGCAGTCGGAATGGTGGAAACTCTCGGTTTCCCCGCAGTAGTAGAAGCAGCAGACGCTATGGTGAAGGCAGC
TCGTGTCACCCTAGTTGGTTACGAAAAAATTGGTAGCGGTCGTGTCACTGTTATCGTTCGTGGTGACGTTTCTGAGGTGC
AAGCTTCCGTCTCCGCTGGAACTGACAATGTTGGTCGTGTTAACGGTGGTCAAGTACTTTCTACACACATCATCGCGCGT
CCTCACGAAAACCTCGAGTACGTTCTCCCCATCCGCTATACCGAAGCTGTTGAACAATTCCGCGAAAGCGTTAATCCCCA
GCCTTTGAGAAGAGTATAG

Protein sequence : 
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGTDNVGRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEAVEQFRESVNPQPLRRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 50
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 5e-15 49
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-15 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lepto7376_0174 YP_007069453.1 microcompartments protein VFG1596 Protein 4e-16 50
Lepto7376_0174 YP_007069453.1 microcompartments protein VFG1598 Protein 2e-15 49
Lepto7376_0174 YP_007069453.1 microcompartments protein VFG1597 Protein 7e-16 47