Gene Information

Name : Lepto7376_2708 (Lepto7376_2708)
Accession : YP_007071807.1
Strain : Leptolyngbya sp. PCC 7376
Genome accession: NC_019683
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3013631 - 3016225 bp
Length : 2595 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAACCCAATAATCCTAATCAATTTACGGAAAAAGCTTGGCAGGCGATCGCCCAAACTCCGGACATCGCCAAACATAA
CCAACAGCAGCAACTCGAAAGTGAACATCTCATGCAAGCATTGCTCGAACAGGGTGGCCTTGCAAAGAGTATTTTTACGA
AAGCTGAAATCTCATTACCTCGTTTGCGTGATCGCACAGATTCATTTATCACAACCCAACCTAAAATCTCGAAACCTAGT
GAGTCAGTCTATTTAGGGCGCAGCTTAGATACCCTTTTAGACCGAGCTGATAACCACAAAAAATCTTTCGGCGATGAGTT
TATTTCCGTTGAGCACTTAATCTTGAGCTATGCGCGGGATGACCGTTTCGGTAAGAAGATTTACCAAGAGTTCGGCTTAA
CGGAAAATAAATTAAAGGAAATAATCAAGCAAATCCGAGGCAATCAAAAGGTGACCGACCAAAATCCAGAAGGCAAATAT
GAATCCCTTGAGAAATATGGTCGTGACCTCACCGAACTTGCACGTAATGGTAAGTTAGACCCTGTAATTGGTCGGGATGA
TGAGATTCGTCGCACTATTCAGATTTTGTCCCGTAGAACCAAAAATAATCCTGTTTTAATCGGTGAACCTGGTGTCGGTA
AGACGGCGATCGCCGAAGGATTAGCGCAACGAATCGTGAATCGTGATGTGCCGGAGTCTCTCAAGGATCGGACGTTAATT
GCGTTGGATATGGGGTCGCTAATTGCGGGCGCAAAATATCGTGGTGAATTTGAAGAACGTCTCAAAGCAGTTCTCAAAGA
AGTCACTGATTCCGAAGGTCAAGTCATTCTCTTTATCGACGAAATCCATACCGTTGTGGGCGCTGGTGCGACCCAAGGGG
CAATGGATGCAGGTAATTTGCTCAAGCCGATGTTGGCGCGGGGCGAACTCCGTTGTATCGGTGCGACAACTCTTGATGAA
TACCGCAAATATATTGAAAAAGATGCGGCTCTCGAACGTCGTTTCCAGTCGGTCATGATCAACGAACCCACAGTCATCGA
TACCATTTCGATTTTGCGAGGTTTAAAGGAACGCTATGAATTGCACCATGGCGTAAAAATTGCAGATACGGCATTAGTGG
CCGCGGCGATGTTGTCTAACCGTTATATTAGCGATCGCTTTTTACCCGACAAAGCCATTGATTTAGTCGATGAATCTGCC
GCCAAACTAAAGATGGAAATCACCTCCAAGCCTGAGGAATTAGACGAAATTGATCGCAAAATTCTTCAGCTCAAGATGGA
ACAAATTTCCCTCAAAAAGGAAAGTGATGCGGCCTCAGTTGAGCGGTTGGCGAAGCTGGAAAAAGAACTCGCAGATCTCC
AAGAAGACCAATCTCATCTCAATGCTCAATGGCAATCTGAGAAAGAAGTCATCGATAAAATTCGTCATATCAAAGAGGAG
ATTGACGCGACAAATCTCGAAATTGAGCAGGCAGAACGGGGTTATGACCTCAACAAAGCGGCTGAATTACGTTATGGCAA
ATTAGCTCAACTTCAACAGCAAGTTAAAGATATCGAGGCTAAACTCTCAGAACAGCAAGTTAGTGGTGATTCTTTACTGC
GAGAAGAGGTTTTAGAGTCGGATATCGCTGAAATTATTTCGAAGTGGACTGGCATTCCCATCAGTAAACTCATTGAATCT
GAAAAAGAAAAACTACTCCATCTCGAAGATGAATTGCATCAACGAGTGATTGGTCAGGAAGAAGCGGTTACTGCTGTTTC
TGAAGCGATTCAGCGATCGCGCGCCGGATTAGCAGATCCCAATCGTCCTACCGCAAGTTTCATTTTCCTTGGTCCCACAG
GTGTCGGTAAAACTGAGTTGGCAAAGGCTTTGGCGCAATTCCTCTTTGATACGGAGGAAGCATTGGTGCGCATCGACATG
TCTGAATACATGGAGAAGCACGCCGTTTCTCGTCTGATGGGAGCGCCTCCGGGATATGTCGGCTATGAGGAAGGTGGTCA
ACTTACCGAAGCCATTCGTCGCCGTCCTTATTCGGTCATCCTGTTTGACGAAATTGAAAAAGCCCATGCCGATGTTTTTA
ACGTGATGCTCCAAATCCTCGATGATGGTCGCCTCACGGATTCGCAGGGCCGCACGGTGGACTTTAAAAATACTGTGATT
ATTATGACCAGTAATATCGGCTCGAATTTTATTCTCGATGTGGCAGGGGATGACTCTCGCTATGAGGAAATGCGATCGCG
GGTAATGGAGGCAATGACCGCAAGTTTCCGCCCAGAATTTCTCAACCGAATTGATGAGCTGATTATTTTCCACGGTCTCA
AAAAAGATCAACTTCGGGAAATTGTGAAATTACAAATCAATGGCCTTGCAGGACGACTCGCCGAACAAAAACTTGGTATT
GAATTATCGGACGAAGCCTACAATTTTGTTGCAGACATTGGTTATGACCCAGTCTATGGAGCTAGACCATTAAAACGCGC
TGTCCAAAAATATGTTGAAACGGCGATCGCCAAAGGCATTCTGAAAGGCGAATTTGTTTCAGGCGAAACCATCAAAGTCC
ATGTCAAAGACGAACGATTAACATTTACTAAATGA

Protein sequence :
MQPNNPNQFTEKAWQAIAQTPDIAKHNQQQQLESEHLMQALLEQGGLAKSIFTKAEISLPRLRDRTDSFITTQPKISKPS
ESVYLGRSLDTLLDRADNHKKSFGDEFISVEHLILSYARDDRFGKKIYQEFGLTENKLKEIIKQIRGNQKVTDQNPEGKY
ESLEKYGRDLTELARNGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNRDVPESLKDRTLI
ALDMGSLIAGAKYRGEFEERLKAVLKEVTDSEGQVILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQSVMINEPTVIDTISILRGLKERYELHHGVKIADTALVAAAMLSNRYISDRFLPDKAIDLVDESA
AKLKMEITSKPEELDEIDRKILQLKMEQISLKKESDAASVERLAKLEKELADLQEDQSHLNAQWQSEKEVIDKIRHIKEE
IDATNLEIEQAERGYDLNKAAELRYGKLAQLQQQVKDIEAKLSEQQVSGDSLLREEVLESDIAEIISKWTGIPISKLIES
EKEKLLHLEDELHQRVIGQEEAVTAVSEAIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKALAQFLFDTEEALVRIDM
SEYMEKHAVSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHADVFNVMLQILDDGRLTDSQGRTVDFKNTVI
IMTSNIGSNFILDVAGDDSRYEEMRSRVMEAMTASFRPEFLNRIDELIIFHGLKKDQLREIVKLQINGLAGRLAEQKLGI
ELSDEAYNFVADIGYDPVYGARPLKRAVQKYVETAIAKGILKGEFVSGETIKVHVKDERLTFTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 6e-102 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 5e-102 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lepto7376_2708 YP_007071807.1 ATP-dependent chaperone ClpB VFG2076 Protein 4e-115 43
Lepto7376_2708 YP_007071807.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-106 42