Gene Information

Name : Oscil6304_2003 (Oscil6304_2003)
Accession : YP_007085592.1
Strain : Oscillatoria acuminata PCC 6304
Genome accession: NC_019693
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2441717 - 2442052 bp
Length : 336 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence : 
ATGTCTATTGCAGTTGGAATGGTAGAAACCCTCGGGTTTCCCGCAGTTGTAGAAGCCGCAGACGCAATGGTGAAAGCCGC
CCGCGTCACCTTAGTCGGATATGAGAAAATCGGAAGCGGTCGCGTCACCGTCATCGTGCGTGGAGATGTTTCGGAAGTGC
AAGCCTCCGTCGGTGCAGCCGTGGAAAATGTCAGACGAGTGAATGGTGGACAAGTCTTGTCTACCCACATCATTGCCCGT
CCTCATGAGAACCTAGAGTATGTCCTCCCGATTCGCTACACCGAAGCGGTGGAGCAATTCCGGGAAAGCACCACAGGCAT
TCGTTTAAGCCGATAA

Protein sequence : 
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVGAAVENVRRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEAVEQFRESTTGIRLSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-17 53
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-15 49
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-16 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oscil6304_2003 YP_007085592.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 2e-17 53
Oscil6304_2003 YP_007085592.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 8e-16 49
Oscil6304_2003 YP_007085592.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 2e-16 48