Gene Information

Name : Chro_1009 (Chro_1009)
Accession : YP_007090411.1
Strain : Chroococcidiopsis thermalis PCC 7203
Genome accession: NC_019695
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1130422 - 1130763 bp
Length : 342 bp
Strand : -
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249:IPR020808; KEGG: cyn:Cyan7425_1617 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein

DNA sequence : 
ATGGCAATCGCAGTAGGAATGATTGAAACGTTGGGCTTCCCCGCAGTTGTGGAAGCAGCAGACGCGATGGTAAAAGCAGC
TCGCGTCACTCTGGTGGGCTATGAAAAGATCGGTAGCGGTCGAGTCACGGTGATCGTACGAGGCGATGTTTCGGAAGTGC
AAGCTTCGGTATCCGCTGGTATAGATTCCGTCAAGCGCGTGAATGGCGGACAGGTCTTGTCTACCCACATCATCGCTCGT
CCTCACGAAAACCTAGAATACGTGCTGCCGATTCGTTATACAGAAGCTGTAGAACAGTTCCGCGAGAGCGTCAGCGGTAT
CCGTCCTTACAACAGACCGTAA

Protein sequence : 
MAIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGIDSVKRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEAVEQFRESVSGIRPYNRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 5e-16 52
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-17 52
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_1009 YP_007090411.1 microcompartments protein VFG1598 Protein 2e-16 52
Chro_1009 YP_007090411.1 microcompartments protein VFG1596 Protein 2e-17 52
Chro_1009 YP_007090411.1 microcompartments protein VFG1597 Protein 7e-17 49