Gene Information

Name : Chro_1010 (Chro_1010)
Accession : YP_007090412.1
Strain : Chroococcidiopsis thermalis PCC 7203
Genome accession: NC_019695
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1130838 - 1131146 bp
Length : 309 bp
Strand : -
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249:IPR020808; KEGG: naz:Aazo_1865 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein

DNA sequence : 
ATGCCGATCGCGGTTGGAATGATTGAGACCAAGGGCTTTCCCGCAGTTGTTGAAGCAGCAGATGCGATGGTAAAAGCTGC
CCGTGTCACTCTAGTGGGTTACGAGAAAATTGGTAGCGCTCGCGTCACGGTGATCGTGCGGGGCGACGTTTCAGAAGTAC
AAGCTTCGGTTTCCGCTGGCATTGAAGCAGCTAAAAGAGTCAATGGTGGTGAAGTTCTCTCCACGCACATCATTGCCCGT
CCCCACGAAAACCTCGAATACGTACTGCCAATTCGCTATACCGAGGCTGTAGAACAGTTCCGCACTTAG

Protein sequence : 
MPIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVSAGIEAAKRVNGGEVLSTHIIAR
PHENLEYVLPIRYTEAVEQFRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-18 56
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-17 54
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-17 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_1010 YP_007090412.1 microcompartments protein VFG1596 Protein 6e-19 56
Chro_1010 YP_007090412.1 microcompartments protein VFG1598 Protein 2e-17 54
Chro_1010 YP_007090412.1 microcompartments protein VFG1597 Protein 8e-18 51