Gene Information

Name : Chro_4669 (Chro_4669)
Accession : YP_007093924.1
Strain : Chroococcidiopsis thermalis PCC 7203
Genome accession: NC_019695
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5247108 - 5249735 bp
Length : 2628 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAACCCACTAATCCCAATCAATTTACCGAAAAAGCCTGGGAAGCGATCGCCCATACCCCAGATATTGCTAAAGCCGT
TCCGCAGCAGCAAATTGAAAGCGAACACTTAATGAAAGCGCTGCTGGACCAAGAAGGCTTGGCAAGTAGTATTTTTAATA
AAGCTGGTGTTAATGTCACGAAGTTACGCGATCGCACCGAGCAATTTATTAAACGTCAGCCCAAACTTTCTGGTAGCGTT
AGCTCTGTTTATCTAGGACGCAGCCTCGATACCCTATTAGATAGAGCTGATGCTTACCGTCAGGAATTTGCTGACGAATA
CATTTCGATCGAGCATTTGTTGTTAGCTTACGCTAAGGACGATCGCTTCGGTAGGAGTTTATTTCAAGAGTTTGGGTTAG
ACGAAAACAAACTAAAAAATACAATTAAACAAGTGCGTGGAAATCAGAAAGTGACCGACCAAAATCCAGAAGGCAAATAC
GAAGCACTCGAAAAGTACGGACGTGACTTGACTGACGCTGCCCGTCAAGGTAAGCTCGATCCCGTAATCGGACGGGACGA
TGAAATTCGTCGCACAGTCCAAATTTTGTCTCGCCGCACTAAAAACAACCCCGTACTGATTGGCGAACCTGGTGTCGGTA
AAACTGCGATCGCCGAAGGCTTAGCACAGCGGATTGTCGCTGGTGACGTACCCCAGTCGCTTAAAGACCGCAAGTTAATC
GCCTTAGATATGGGAGCATTAATTGCAGGGGCGAAGTTTCGGGGTGAGTTTGAAGAACGTCTAAAAGCGGTATTGAAAGA
AGTCACCGAGTCTAAAGGTAATATCGTCCTATTTATCGACGAAATTCATACCGTTGTCGGTGCGGGTGCTACCCAAGGGG
CGATGGATGCAGGGAACTTGCTCAAACCAATGCTAGCGCGGGGTGAACTGCGTTGTATTGGGGCGACAACTTTGGATGAG
TACCGCAAATATATTGAAAAAGATGCGGCGTTGGAACGACGTTTCCAACAAGTTTATGTCGATCAACCCAGCGTAGAAGA
TACAATTTCGATTCTGCGCGGTTTGAAAGAACGGTATGAAGTCCACCACGGGGTAAGAATTTCCGATAGTGCTGTGGTTG
CAGCAGCTACTCTGTCAAATCGGTACATTAGCGATCGCTTTTTACCCGACAAAGCAATCGACTTGGTAGACGAGGCGGCG
GCGCGGCTGAAAATGGAAATCACCTCAAAGCCGGAAGAATTAGACGAGATCGATCGCAAGATATTGCAATTAGAAATGGA
ACGCTTATCTTTAGAAAAAGAGAGCGATCCGGCTTCGCGTGAAAGGTTAGGACGGTTAGAAAAAGAAGTTGCCGATCTCA
AGGAAGAACAAGCGGCGCTTAACGCTCAATGGCAGTCTGAAAAGGATGTTATTAATAAAATTCAGTCTGTCAAAGAAGAG
ATCGATCGCGTCAACGTCGAAATTCAGCAAGCAGAAAGAGATTACGATCTCAATAAAGCGGCAGAATTAAAATATGGAAA
ATTGACCGATTTGCATCGACAATTGGAAGCCGCTGAAAGTCAGTTAACCCAAACGCAAACAACGGGTAAATCGCTGCTAC
GGGAGGAAGTTACTGAAGCCGATATCGCTGAAGTTATTTCTAAGTGGACGGGTATTCCAATCAGTAAGTTAGTCGAAACT
GAGAAAGAGAAACTACTCAACTTAGAAGACGAATTGCACCATCGTGTCATCGGGCAAAATGAAGCAGTGACAGCTGTAGC
TGATGCGATTCAGCGATCGCGTGCTGGTTTAGCCGATCCAAATCGTCCGATTGCTAGTTTTATTTTCCTCGGTCCCACGG
GTGTAGGCAAGACCGAATTGGCGAAGGCTTTAGCCGCATATCTCTTCGACACCGAAGAGGCGTTGGTACGGATCGATATG
TCGGAGTACATGGAGAAACACGCCGTATCGCGTTTAATTGGCGCGCCTCCTGGTTATGTAGGTTATGACGAAGGGGGACA
ACTGACTGAAGCGATTCGCCGTCGTCCGTATTCTGTCGTGTTATTCGACGAAATCGAAAAAGCACACCCAGATGTTTTCA
ACGTCATGCTGCAAATTTTAGATGACGGTAGGGTGACGGATGCTCAAGGTCATACAGTGGATTTCAAGAATACCATTGTG
ATTATGACCAGCAACATCGGTTCGCAATACATTTTAGATATTGCCGGGGATGACTCGCGCTATGAAGAAATGCGCGGTCG
GGTGATGGAAGCGATGCGTAATAGTTTCCGTCCAGAATTCCTCAACCGAATTGACGAGATCATTATTTTCCACGCTCTAC
AAATACAAGAATTGCGGCAGATTGTCAAGTTGCAAATTCAGCGATTGGAGCAAAGACTGGGCGATCGCAAGATGTCGTTG
CGTCTTTCTGATGCTGCTTTAGATTTCTTGGCAGAAGTAGGTTACGATCCCGTATTTGGTGCGCGTCCTTTAAAACGAGC
AATTCAGCGGGAATTGGAAACGCAAATTGCTAAGTCAATTCTGCGGAATGAATTCAACGACGGCGATACGATTTTTGTTG
ATGTGGAAAACGAACGTCTTGCTTTTAAGCGTTTGCCCGTGGAGATATTAACGACACAATCTAATTAA

Protein sequence :
MQPTNPNQFTEKAWEAIAHTPDIAKAVPQQQIESEHLMKALLDQEGLASSIFNKAGVNVTKLRDRTEQFIKRQPKLSGSV
SSVYLGRSLDTLLDRADAYRQEFADEYISIEHLLLAYAKDDRFGRSLFQEFGLDENKLKNTIKQVRGNQKVTDQNPEGKY
EALEKYGRDLTDAARQGKLDPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKLI
ALDMGALIAGAKFRGEFEERLKAVLKEVTESKGNIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERYEVHHGVRISDSAVVAAATLSNRYISDRFLPDKAIDLVDEAA
ARLKMEITSKPEELDEIDRKILQLEMERLSLEKESDPASRERLGRLEKEVADLKEEQAALNAQWQSEKDVINKIQSVKEE
IDRVNVEIQQAERDYDLNKAAELKYGKLTDLHRQLEAAESQLTQTQTTGKSLLREEVTEADIAEVISKWTGIPISKLVET
EKEKLLNLEDELHHRVIGQNEAVTAVADAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYLFDTEEALVRIDM
SEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAIRRRPYSVVLFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDFKNTIV
IMTSNIGSQYILDIAGDDSRYEEMRGRVMEAMRNSFRPEFLNRIDEIIIFHALQIQELRQIVKLQIQRLEQRLGDRKMSL
RLSDAALDFLAEVGYDPVFGARPLKRAIQRELETQIAKSILRNEFNDGDTIFVDVENERLAFKRLPVEILTTQSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-109 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-103 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-103 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chro_4669 YP_007093924.1 ATP-dependent chaperone ClpB VFG2076 Protein 4e-117 43
Chro_4669 YP_007093924.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-109 43