Gene Information

Name : Cha6605_4351 (Cha6605_4351)
Accession : YP_007098814.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4597909 - 4598262 bp
Length : 354 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence : 
ATGTCTATTGCTGTTGGGATGATCGAAACCTTGGGCTTTCCCGCCGTTGTGGAAGCTGCTGACGCTATGGTTAAAGCCGC
TCGCGTCACACTAGTCGGCTACGAAAAAATCGGTAGCGGTCGCGTTACTGTCATCGTTCGTGGCGACGTTTCGGAAGTAC
AAGCTTCTGTATCCGCAGGTGTTGAATCTGTCAAGCGCGTTAATGGCGGTCAAGTACTGTCTACACACATCATCGCTCGT
CCTCATGAAAACCTTGAGTACGTCTTGCCCATGAACTACACCGAAGATGTAGAGAAATTCCGCGATAGTTTGAATGGCCC
CGGCCCACTCGCGATCGGCGGTAGACGTTCTTAA

Protein sequence : 
MSIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGVESVKRVNGGQVLSTHIIAR
PHENLEYVLPMNYTEDVEKFRDSLNGPGPLAIGGRRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-17 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-16 53
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_4351 YP_007098814.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 1e-17 54
Cha6605_4351 YP_007098814.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 4e-16 53
Cha6605_4351 YP_007098814.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 9e-17 51