Gene Information

Name : Cha6605_4358 (Cha6605_4358)
Accession : YP_007098821.1
Strain : Chamaesiphon minutus PCC 6605
Genome accession: NC_019697
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4602468 - 4602815 bp
Length : 348 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence : 
ATGGCTGATTCCATGAGTTCTCAACAGGCAGTTGGTTCGATCGAAACCAAAGGGTTTCCCGCTGTCTTAGCCGCTGCTGA
TGCGATGCTCAAAGCAGGACGCGTCACTCTAGTCGGATACCTTAGGGCTGGTAGTGCCCGTTTCACCGTCAACGTGCGCG
GTGATGTCTCCGAAGTCAAGCAAGCAATGGCGGCTGGTGTCGATGTGGTCGAAAAAGTGTACGGTGGAACCTTAGAATCT
TGGGTGATCATCCCGCGTCCGCATCCCAACGTTGAGCGAATTTTGCCAATTGGTTATACTGAAGAAGTCGAAGAATTTCG
CGCTCAAGTTGAAGGTCGCATTAGCTAG

Protein sequence : 
MADSMSSQQAVGSIETKGFPAVLAAADAMLKAGRVTLVGYLRAGSARFTVNVRGDVSEVKQAMAAGVDVVEKVYGGTLES
WVIIPRPHPNVERILPIGYTEEVEEFRAQVEGRIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-07 45
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-08 43
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_4358 YP_007098821.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 9e-08 45
Cha6605_4358 YP_007098821.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 5e-09 43
Cha6605_4358 YP_007098821.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 1e-08 42