Gene Information

Name : Pse7367_3549 (Pse7367_3549)
Accession : YP_007104212.1
Strain : Pseudanabaena sp. PCC 7367
Genome accession: NC_019701
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4435563 - 4438217 bp
Length : 2655 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR0177

DNA sequence :
ATGCAGCCGTCCGATCCAAACAAATTTACAGAAAAAGCCTGGGAAGCGATCGTTAAATCGCAAGATGTGGCCAGACGTGC
CCAGCATCAGCAGCTAGAGTCGGAGCACATGTTGATCTCGCTGCTAGAGCAAAGAGGCTTGGCCACAGAAATATTAACTG
CTCTATCGGTGCCGATCGCCCGGCTGATTAAGCAAGCTGAAGATTTTTTGCGCCAACAACCCCGTGTAGCCAACATCGAG
CAATTATATTTGGGGCGGAGTATTGAAACCTGGCTCGATCGTGCCGATCAATCCCGTCAACAATTTGGTGATGAATTTAT
TTCGGTTGAGCATTTGCTGCTTGCCTGGCTCGATGACGATCGCTTTGGTCGCCGCCTCAGTCGTAGTTTGAATCTAGATC
AAGAGACCGTCGAAGCAGTAATCAAGCAGATGCGGGGTAATCAAACCGTCTCTGACCAAAACCCCGAAGCCAAATATGCC
GCGCTCGAAAAATTTGGCCGCGATCTCACTGCCCAAGCCGAAGAAGGCAAGCTCGACCCGGTAATTGGCCGTGATGATGA
GATCAGGCGGGTGATTCAGGTGCTTTCTCGCCGGACTAAAAATAATCCGGTTTTAATTGGTGAGCCAGGAGTCGGTAAAA
CGGCGATCGCCGAAGGTCTGGCACAGCGGATCATTCGTGGTGATGTACCCGAATCGCTCAAAAACCGTACCCTGTTTAGC
CTGGATATGGGCGCATTGATCGCTGGCGCTAAGTATCGCGGTGAGTTTGAAGATCGGCTCAAGGCGGTGCTCAAGGAAGT
TATTACCTCTGAGGGGCAGATTGTGCTGTTCATCGACGAATTACATACAGTGGTGGGGGCAGGAGCTACCCAGGGATCGA
TGGATGCGGGTAATTTGCTCAAGCCTTTGCTAGCCAGAGGTGAACTGCGTTGTATTGGTGCAACCACCCTGGATGAATAT
CGCAAGCACATTGAAAAAGATCCGGCTCTGGAGCGGAGATTCCAGCAAATTGTGGTCGATCAACCCACCGTTGAAGATAC
GATCTCGATTTTACGGGGTTTAAATGAGCGCTATGAAGTGCATCATGGCGTTAATATTTCCGACTCCGCCCTGGTGGCAG
CGGCAGTGTTATCCAATCGCTATATTAGCGATCGCTTTCTGCCAGACAAAGCGATTGATCTGGTGGATGAAGCGGCAGCC
AAGCTCAAAATGGAAATTACCTCCAAACCGATCGAACTGGATGAAATCGATCGCCGTCTGATGCAATTGCAAATGGAGCG
CTTGTCGCTCAAAAAAGAAGAAACCGATGCGATCGCCTCCCTCGATCGGGTCGAAGAAGGGGGCAAGATATCTTATAAAA
ATAAAAGTGCCCAGGCCACCCTGGAGCGCTTGGAGCGGATTAATGAAGAGATTACTAGTTTACAAGTTAAGCAAACGGAA
TTAAGTAAGCGTTGGCAGGGCGAAAAGGAAACGATCGACAATTTGCAAAACCTGAAGGAGCAGATCGATCATATTAAGCT
GCAAATTGAGCAGGCCGAACGCGATTATGACCTCAGTTCAGCGGCAGAACTGAAATATGGCAAGTTAACCGATCTCGAAA
AGCAACTGGACGAAGCGGAGCTAGAGCTAAGCAAGGCGAGATCCGATGGCTATAGCCTTTTCCGCGAACAGGTCAGCGAA
GATGATATTGCTGAGATCGTGGCCAAATGGACGGGGATTCCGGTTAAGAGCCTATTAGAATCAGAACGCCAGAAATTGCT
CAAGCTAGAATCACACCTCCATGAACGGGTGATTGGCCAAGAGGAGGCAGTGGAATCAGTCTCAGCGGCGATCCGCCGTG
CCAGAGCAGGCATGAAAGATCCCAATCGACCGATCGGCTCGTTTTTGTTTCTGGGCCCGACTGGAGTTGGTAAAACTGAG
CTGGCCAGAGCCCTGGCGCAATTTCTGTTTGATACCGAAGATGCGATCGTGCGACTGGACATGTCTGAATATATGGAGAA
GCACTCGGTATCTCGTTTAATTGGTGCGCCACCAGGTTATGTGGGCTATGAAGAAGGGGGGCAATTTTCTGAGGCCGTCC
GCCGCCATCCCTATTGTGTGGTGCTGTTTGATGAGGTGGAAAAAGCCCATCCCGATGTGTTTAATATTTTGCTGCAAGTG
CTGGATGATGGCCGGATCACCGATAGCCAGGGCAGGCTGATCGATTGCAAAAATACTGTGATCATTATGACCAGTAATAT
TGGCAGCGATCATATTTTAGAAGTTGCTGGCGACGACGATCGCTATGAGGAAATGCAAACCCTGGTGATGACAGCGTTGC
GCAAGCGGTTTCGCCCCGAATTCCTGAATCGGATCGATGACACAATTATTTTCCATGCCTTGCTCAAGTCAGAAATCAGG
TCGATCGCTGATCTGCAAATCCAGCGTCTGGAGTCGCGTTTAGCCGATCAAAAAATCAGTTTTGTAATCACACCAGAAGC
CCTGGATTATATTGCCCTAGCTGGCTATGATCCTGTGTTTGGTGCCAGGCCGTTGCGTCGAGCAATTCAGCGCGAAATCG
AAAACCCGATCGCCACTAAAATCCTGGAGGGTGCTTTTCCACCAGGACACCAGATCAAGATCGCAGTTGAAGACGATTGT
TTAACTTTTAAATAG

Protein sequence :
MQPSDPNKFTEKAWEAIVKSQDVARRAQHQQLESEHMLISLLEQRGLATEILTALSVPIARLIKQAEDFLRQQPRVANIE
QLYLGRSIETWLDRADQSRQQFGDEFISVEHLLLAWLDDDRFGRRLSRSLNLDQETVEAVIKQMRGNQTVSDQNPEAKYA
ALEKFGRDLTAQAEEGKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIRGDVPESLKNRTLFS
LDMGALIAGAKYRGEFEDRLKAVLKEVITSEGQIVLFIDELHTVVGAGATQGSMDAGNLLKPLLARGELRCIGATTLDEY
RKHIEKDPALERRFQQIVVDQPTVEDTISILRGLNERYEVHHGVNISDSALVAAAVLSNRYISDRFLPDKAIDLVDEAAA
KLKMEITSKPIELDEIDRRLMQLQMERLSLKKEETDAIASLDRVEEGGKISYKNKSAQATLERLERINEEITSLQVKQTE
LSKRWQGEKETIDNLQNLKEQIDHIKLQIEQAERDYDLSSAAELKYGKLTDLEKQLDEAELELSKARSDGYSLFREQVSE
DDIAEIVAKWTGIPVKSLLESERQKLLKLESHLHERVIGQEEAVESVSAAIRRARAGMKDPNRPIGSFLFLGPTGVGKTE
LARALAQFLFDTEDAIVRLDMSEYMEKHSVSRLIGAPPGYVGYEEGGQFSEAVRRHPYCVVLFDEVEKAHPDVFNILLQV
LDDGRITDSQGRLIDCKNTVIIMTSNIGSDHILEVAGDDDRYEEMQTLVMTALRKRFRPEFLNRIDDTIIFHALLKSEIR
SIADLQIQRLESRLADQKISFVITPEALDYIALAGYDPVFGARPLRRAIQREIENPIATKILEGAFPPGHQIKIAVEDDC
LTFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-105 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-103 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-103 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pse7367_3549 YP_007104212.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-115 42
Pse7367_3549 YP_007104212.1 ATP-dependent chaperone ClpB VFG2084 Protein 6e-107 41