Gene Information

Name : Syn7502_00606 (Syn7502_00606)
Accession : YP_007104891.1
Strain : Synechococcus sp. PCC 7502
Genome accession: NC_019702
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 610038 - 610385 bp
Length : 348 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence : 
ATGGCAATTGCAGTTGGAATGATTGAAACCCTAGGTTTTCCCGCCGTTGTAGAAGCAGCCGATGCGATGGTAAAGGCAGC
CCGCGTCACCCTAGTTGGTTACGAAAAAATTGGTACTGGTCGAGTGACTGTAATCGTCCGTGGCGATGTATCAGAAGTTC
AAGCATCCGTAGCGGCTGGTGTTGAATCAGTCAAGCGTGTTAATGGCGGACAAGTTCTTTCTACCCACATCATCGCTCGT
CCCCACGAAAACCTGGAATACGTTCTACCCATTCGCTACACCGAAGCAGTGGAACCATTCCGTGAAAATGTTAGCGGCAT
CCGTCCTCTTCCCGTTTCTAGACCATAA

Protein sequence : 
MAIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKIGTGRVTVIVRGDVSEVQASVAAGVESVKRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEAVEPFRENVSGIRPLPVSRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-17 53
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 6e-16 52
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Syn7502_00606 YP_007104891.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 2e-17 53
Syn7502_00606 YP_007104891.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 2e-16 52
Syn7502_00606 YP_007104891.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 6e-17 50