Gene Information

Name : GEI7407_0410 (GEI7407_0410)
Accession : YP_007107963.1
Strain : Geitlerinema sp. PCC 7407
Genome accession: NC_019703
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 492507 - 492815 bp
Length : 309 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249:IPR020808; KEGG: syp:SYNPCC7002_A1803 carbon dioxide concentrating mechanism protein; PFAM: microcompartments protein; SPTR: Carbon dioxid

DNA sequence : 
ATGCCGATTGCGGTTGGAATGATTGAAACGAAGGGATTCCCTGCGGTTGTGGAAGCAGCTGACGCGATGGTGAAGGCCGC
TCGCGTGACCCTGGTGGGCTACGAGAAAATCGGCAGCGGCCGCGTGACAGTGATTGTCCGGGGCGATGTGTCTGAAGTAC
AAGCCTCTGTGGCTGCTGGTATTGAATCTGCTAAGCGTGTCAACGGCGGTGAAGTGCTCTCTACTCACATCATTGCTCGT
CCCCACGAGAACCTGGAATACGTTCTGCCTATTCGCTACACCGAAGAAGTAGAGCAGTTCCGGACCTGA

Protein sequence : 
MPIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGIESAKRVNGGEVLSTHIIAR
PHENLEYVLPIRYTEEVEQFRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-17 56
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 8e-19 56
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 9e-18 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_0410 YP_007107963.1 microcompartments protein VFG1598 Protein 7e-18 56
GEI7407_0410 YP_007107963.1 microcompartments protein VFG1596 Protein 3e-19 56
GEI7407_0410 YP_007107963.1 microcompartments protein VFG1597 Protein 4e-18 53