Gene Information

Name : GEI7407_0411 (GEI7407_0411)
Accession : YP_007107964.1
Strain : Geitlerinema sp. PCC 7407
Genome accession: NC_019703
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 492928 - 493269 bp
Length : 342 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249:IPR020808; KEGG: cyn:Cyan7425_1617 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein

DNA sequence : 
ATGTCTATCGCAGTTGGAATGATTGAAACGCTGGGCTTTCCTGCGGTTGTGGAAGCAGCTGACGCGATGGTGAAGGCCGC
TCGCGTGACCCTGGTGGGCTACGAGAAAATCGGCAGCGGCCGCGTGACGGTGATTGTTCGCGGTGACGTGTCTGAAGTGC
AAGCTTCTGTGTCTGCTGGCATCGAGAACGTGAAGCGCGTCAACGGCGGTCAGGTGCTCTCGACCCACATTATCGCTCGT
CCCCACGAGAACCTGGAGTACGTACTCCCCATTCGCTACACCGAAGATGTTTCCCAGTTCCGTGAGAGCGTGAGCGGTAT
TCGTCCTATCGGCAGACCATAA

Protein sequence : 
MSIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGIENVKRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEDVSQFRESVSGIRPIGRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-17 53
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 6e-16 52
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEI7407_0411 YP_007107964.1 microcompartments protein VFG1596 Protein 1e-17 53
GEI7407_0411 YP_007107964.1 microcompartments protein VFG1598 Protein 2e-16 52
GEI7407_0411 YP_007107964.1 microcompartments protein VFG1597 Protein 1e-16 49