Gene Information

Name : Osc7112_1982 (Osc7112_1982)
Accession : YP_007114875.1
Strain : Oscillatoria nigro-viridis PCC 7112
Genome accession: NC_019729
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2323293 - 2323601 bp
Length : 309 bp
Strand : -
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: cya:CYA_1612 carbon dioxide concentrating mechanism protein CcmK; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment

DNA sequence : 
ATGGGTGTTGCACTGGGAATGGTTGAAGTCTTAGGATTTCCCGCTGCCGTAGAAGTTGCAGACTCAATGGTGAAAGCAGC
CCGTGTTACTTTAGTTCGCTATGAGAAAATAACCCGCGCCTACTGGACAATTATAGTGCGAGGAGATGTTTCTGAAGTGC
AAGCAGCCGTTGATGCTGGAATTGAATCAGTTAAAAAGGTCGATGGCGGAAAGTTGCTATCGTATCACATAATTGCTCGT
CCCCACGAGAATCTGGATTACGTTTTGCCGATCGGCTATACTCCCGAAGTCGAACAGTTCCGAATGTAG

Protein sequence : 
MGVALGMVEVLGFPAAVEVADSMVKAARVTLVRYEKITRAYWTIIVRGDVSEVQAAVDAGIESVKKVDGGKLLSYHIIAR
PHENLDYVLPIGYTPEVEQFRM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-13 43
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-13 43
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-13 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Osc7112_1982 YP_007114875.1 microcompartments protein VFG1597 Protein 1e-13 43
Osc7112_1982 YP_007114875.1 microcompartments protein VFG1596 Protein 1e-13 43
Osc7112_1982 YP_007114875.1 microcompartments protein VFG1598 Protein 4e-13 42