Gene Information

Name : Osc7112_5168 (Osc7112_5168)
Accession : YP_007117838.1
Strain : Oscillatoria nigro-viridis PCC 7112
Genome accession: NC_019729
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6182402 - 6182713 bp
Length : 312 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: ava:Ava_4472 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria; SPTR:

DNA sequence : 
ATGTCAATTGCCGTGGGAATGATTGAGACAAAAGGTTTTCCCGCTGTTGTGGAAGCTGCCGATGCTATGGTCAAAGCTGC
CCGCGTTACTCTCGTGGGCTATGAAAAAATCGGCAGCGCCCGCGTCACCGTGATTGTGCGCGGCAACGTGTCGGAAGTCC
AAGCCTCAGTCGCAGCCGGAGTGGAATCCGTCAAGCGGGTGAACGGCGGAGAAGTCGTCTCTACCCACATCATCGCTCGC
CCCCACGAAAACCTAGAATACGTTCTGCCGATTCGATATACAGAAGCAGTAGAACAGTTCCGAGGCTACTAA

Protein sequence : 
MSIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGNVSEVQASVAAGVESVKRVNGGEVVSTHIIAR
PHENLEYVLPIRYTEAVEQFRGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-18 55
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-17 54
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-17 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Osc7112_5168 YP_007117838.1 microcompartments protein VFG1596 Protein 9e-19 55
Osc7112_5168 YP_007117838.1 microcompartments protein VFG1598 Protein 2e-17 54
Osc7112_5168 YP_007117838.1 microcompartments protein VFG1597 Protein 6e-18 52