Gene Information

Name : Osc7112_5169 (Osc7112_5169)
Accession : YP_007117839.1
Strain : Oscillatoria nigro-viridis PCC 7112
Genome accession: NC_019729
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6182810 - 6183151 bp
Length : 342 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: cyn:Cyan7425_1617 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria; S

DNA sequence : 
ATGGCAATTGCAGTTGGCATGATCGAAACCCTAGGCTTCCCCGCAGTTGTAGAAGCCGCTGACGCGATGGTCAAAGCAGC
CCGCGTCACCTTGGTAGGCTACGAAAAAATCGGTAGCGCTCGGGTTACGGTCATTGTAAGAGGAGATGTCTCGGAAGTGC
AAGCTTCTGTCGCCGCCGGAGTAGAGTCAGTGAAGCGCGTTAACGGCGGACAAGTGATGTCCACCCACATTATCGCCCGC
CCTCACGAAAACTTGGAGTACGTGCTGCCCATTCGCTACACCGAAGCTGTAGAACAGTTCCGTGAAGGCGTCAGCGGCAT
TCGCCCCCTCAACAGATCGTAA

Protein sequence : 
MAIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVAAGVESVKRVNGGQVMSTHIIAR
PHENLEYVLPIRYTEAVEQFREGVSGIRPLNRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 9e-17 53
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 52
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-16 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Osc7112_5169 YP_007117839.1 microcompartments protein VFG1596 Protein 3e-17 53
Osc7112_5169 YP_007117839.1 microcompartments protein VFG1598 Protein 5e-16 52
Osc7112_5169 YP_007117839.1 microcompartments protein VFG1597 Protein 2e-16 50