|
Name : Osc7112_6247 (Osc7112_6247) Accession : YP_007118839.1 Strain : Oscillatoria nigro-viridis PCC 7112 Genome accession: NC_019729 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase, class II Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 7471412 - 7472965 bp Length : 1554 bp Strand : + Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IP DNA sequence : ATGACTCTGAGTGAAGCCGAAGTCCGCAGTCAAAAAGTAGACGAACTGCGATCGCAAGGCATAGAACCGTATCCCAGTGA ATCCTACGCGCGATCGCACACAGCCAAGCAAGTTCGCCAAATATTTAGTCAGCCGGGAAAAGAACTCGAAAACGGACAAA GTGACCCCGAAGAAATTCCCCTGCGATTAGCCGGCCGCATCACTTCCAAGCGAGACAGCGGCAAAATTGGTTTCATCGAT TTAAAAGACGCCACAGACAAAATTCAACTCAAAATCGAGAAAAAAATAGTAACCGGCGAAGTTGGTTTGAGCTTTGAACA AATTAAAAAATTGCTCGATGTCGGCGATTTTGTCGGCGTCGAAGGTATCGGCTGCCGCACCCCCAGGGGAGAACTTTCTA TTTTAGTGAGGGAATTAAAGCTGTTATCAAAAGCTACCATTCAATTTCCCGATGCTTATTACGGAATTAACGACCCCGAA GTTTGCCGCCGTCACCGCGAAATGGATTTGGCAAGCAACCAAGATGCGCTCAACCGTTTTATGCTGCGAAGCCGCATCGT TCAAAGCATCCGTTCCTATCTCTGGCAAGCAAATTTTTACGAAATAGAAACGCCGACACTGCAAGCTATTTACGGCGGTG CTGCTGCCAAGCCATTCATCACTCACCACAATGCTTTAGAGGTGGATTTGTATTTGCGAGTGGCTCCAGAATTATTCTTA AAAAGAGCGATTTGCGGCGGTTTCGAGCGAGTATTTGAACTAGGGAAAGCATTTAGAAATGAGGGCATTGACAGCACCCA CAATCCAGAGTTTACCTCTTTAGAAGTTTACCAAGCTTATGCTGATGTCTTCGACATTTTAACAGTTGTCGAAGACGTGA TATGTTTCGCAGCGGCTGCTGTATTTGGGGATGTCAAAGAAATTGAAAATCAGGGGGAAACGATTAGTTTAGAACGCAAG TTCGACTACAGCGAAAAATATCCCGGTTTCAGCGGCAAACACTGGCAAGTGAAAACGATGGTAGAAGCTGTCAGAGACGA GTTTGGGCTGGATTTTGACAGTTTGGACTTGGAAAGTGCGATCGACTCTGCAACCAAACTAGAATTGCACCTCTCTAAGT TAGAACAACAGAGTTTAGGCTACGTGCTCTATGCAGTTTTTGACAAGTTAGTTGTTCCCAAACTAATTCAACCTACATTC ATCATCGACTACCCTGTTGAAGTCAGTCCCTTAGCAAAAGGACATCGCAGCAAGCCCGGATTTGTAGAACGTTTCGAGCT ATTTATCAACGGTACAGAATACTCGAACGGCTTCTCAGAATTGAACGATCCGAAAGAGCAAAGAAAGCGGTTTGAGGAAC AGTTAGCGCAGAAAAATGCCGGCGATGACGAAGCGCATCCAATGGATGAAGACTTTATTCAAGCGCTATCTTTGGGAATG CCTAATTGTGCGGGCATGGGCATCGGCGTAGACAGATTGGTGATGCTTTTAACTAATACTCAAAGCATCCGAGATGCCGT CATGTTCCCGACAATGCGGCCGGTCAAAGATTGA Protein sequence : MTLSEAEVRSQKVDELRSQGIEPYPSESYARSHTAKQVRQIFSQPGKELENGQSDPEEIPLRLAGRITSKRDSGKIGFID LKDATDKIQLKIEKKIVTGEVGLSFEQIKKLLDVGDFVGVEGIGCRTPRGELSILVRELKLLSKATIQFPDAYYGINDPE VCRRHREMDLASNQDALNRFMLRSRIVQSIRSYLWQANFYEIETPTLQAIYGGAAAKPFITHHNALEVDLYLRVAPELFL KRAICGGFERVFELGKAFRNEGIDSTHNPEFTSLEVYQAYADVFDILTVVEDVICFAAAAVFGDVKEIENQGETISLERK FDYSEKYPGFSGKHWQVKTMVEAVRDEFGLDFDSLDLESAIDSATKLELHLSKLEQQSLGYVLYAVFDKLVVPKLIQPTF IIDYPVEVSPLAKGHRSKPGFVERFELFINGTEYSNGFSELNDPKEQRKRFEEQLAQKNAGDDEAHPMDEDFIQALSLGM PNCAGMGIGVDRLVMLLTNTQSIRDAVMFPTMRPVKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-82 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Osc7112_6247 | YP_007118839.1 | lysyl-tRNA synthetase, class II | VFG1668 | Protein | 1e-82 | 41 |
