Gene Information

Name : Mic7113_2468 (Mic7113_2468)
Accession : YP_007121676.1
Strain : Microcoleus sp. PCC 7113
Genome accession: NC_019738
Putative virulence/resistance : Unknown
Product : glycolate oxidase subunit GlcD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2841257 - 2842726 bp
Length : 1470 bp
Strand : +
Note : PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain

DNA sequence :
ATGATTGCCCAAGAAACCCAACGCAACTGGAAACCCATCATCAAGCAATTTGAGGCAGTTGTGGGTAAAGACGGCGTGGT
TCGCCGCAAAGAAGAATTACTCACCTACGAATGTGATGGTTTAGCCAGTTATCGCCAACGACCGGCATTGGTAGTGTTGC
CGCGAACCACCGAACAAGTGGCAGAGGCAGTAAAAATCTGCGACCAAAACCAAATCCCTTGGGTGGCGCGGGGTGCTGGC
ACAGGTTTATCGGGGGGTGCCTTACCTGTAGAGGATTGTGTGTTAATTGTCACCGCGTTGATGAAGCGCATTCTCGACGT
TGACCTAGAAAATCAGCGTATCGTTGTGCAGCCAGGGGTGATCAACAACTGGGTAACCCAAGCCGTTAGTGGGGCAGGTT
TTTACTACGCACCTGACCCCTCTAGCCAAATTATCTGTTCAATTGGTGGCAATGTTGCTGAAAATTCCGGCGGTGTTCAT
TGCCTCAAATATGGTGTTACAACTAATCATGTTTTGGGATTAAAATTAGTTCTTCCGGATGGTTCAATTGTGGATGTCGG
GGGTTCGGTGCCAGAATTTCCCGGTTACGACCTCACGGGTCTATTTGTTGGTTCCGAAGGGACTTTAGGTATCGCCACAG
AAATTACGCTACGCATCCTGAAAACACCTGAATCCATTTGTGTCCTCCTTGCAGATTTTGCCACGGTTGAAGAATCGGGT
GCGGCTGTTGCCGATATTATCAGTTCCGGGATTATTCCAGGTGGCATGGAGATTATGGATAATCTCAGTATTAATGCCGT
GGAAGATGTGGTGGCAACGGGATGTTATCCCAGGGATGCGGGTTCTATTTTGTTGGTGGAATTGGATGGTTTGGAGGTAG
AAGTGGCAACCAGTAAACAACGTGTTGCCGAACTTTGTAAGAAGAATGGGGCACGAAATATCACCACGGCAAGTGACCCC
GAAACCCGCTTGAAATTATGGAAAGGTCGCAAAGCCGCTTTTGCCGCAGCAGGTCACATGAGTCCAGATTATTTTGTTCA
AGATGGGGTGATTCCCCGTACTCAATTGGTAGGTGTGCTGAAAGAAATTGAAGCATTGAGTGAAAAATACGGGTACGCGA
TCGCTAATGTATTTCATGCCGGTGATGGTAACCTTCATCCCTTGATTCTTTACGATAATTCGATTCCAGGTGCGCTGCAT
AAAGTGGAAGAATTAGGGGGGGAAATTCTTAAACTCTGTGTAAAAGTGGGCGGTAGTATTTCTGGGGAACATGGAATTGG
TGCGGATAAGAAGTGCTTTATGCCCGATATGTTTAGTGAGACCGATTTAGAAACCATGCAATGGGTGCGGCAAGTCTTTA
ATCCAAAAGGTTTAGCCAATCCCGGTAAAATTTTTCCGACTCCTCGCACTTGTGGTGAATCGGCAAAGGCTCAAAATTTA
GGACAATTTAAGCAATCAGAAGTCTTTTAA

Protein sequence :
MIAQETQRNWKPIIKQFEAVVGKDGVVRRKEELLTYECDGLASYRQRPALVVLPRTTEQVAEAVKICDQNQIPWVARGAG
TGLSGGALPVEDCVLIVTALMKRILDVDLENQRIVVQPGVINNWVTQAVSGAGFYYAPDPSSQIICSIGGNVAENSGGVH
CLKYGVTTNHVLGLKLVLPDGSIVDVGGSVPEFPGYDLTGLFVGSEGTLGIATEITLRILKTPESICVLLADFATVEESG
AAVADIISSGIIPGGMEIMDNLSINAVEDVVATGCYPRDAGSILLVELDGLEVEVATSKQRVAELCKKNGARNITTASDP
ETRLKLWKGRKAAFAAAGHMSPDYFVQDGVIPRTQLVGVLKEIEALSEKYGYAIANVFHAGDGNLHPLILYDNSIPGALH
KVEELGGEILKLCVKVGGSISGEHGIGADKKCFMPDMFSETDLETMQWVRQVFNPKGLANPGKIFPTPRTCGESAKAQNL
GQFKQSEVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcD CAE85245.1 GlcD protein Not tested PAI V 536 Protein 1e-107 52