Gene Information

Name : Glo7428_1360 (Glo7428_1360)
Accession : YP_007127087.1
Strain : Gloeocapsa sp. PCC 7428
Genome accession: NC_019745
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1502469 - 1505087 bp
Length : 2619 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAACCAACAAATCCAAATCAGTTTACCGAAAAAGCGTGGGAAGCGATCGCCCACACGCCAGATATCGTCAAAGCCGC
ACAACAGCAGCAGATCGAAAGCGAACACTTAATGAAAGCGCTGCTCGAACAAGACGGCTTAGCGAGTAGTATCTTAACAA
AAGCCGGAGTTAACGTTCAGAAAGTCCGAGAACGCGCCGAACAATTTATTCAACGTCAACCGAAAGTTTCCGGTAGTGGA
AGTTCCGTATATTTAGGACGTAGCTTAGATACACTACTTGACCGCGCCGAAAACTATCGTAAAGAATTAGCCGATGAATA
TATTTCAATCGAACACTTATTATTAGCCTACGTAAACGACGATCGCTTCGGGAAAAGCCTATTTCAAGAATTTGGTTTAG
ACGAAGCAAAACTCAGGGGTATCATTAAACAAGTTCGAGGAAGTCAGAGAGTGACTGACCAAAATCCAGAAGGCAAATAC
GAATCACTAGAAAAATACGGGCGCGACCTCACCGAAGCCGCGCGTCAAGGTAAACTTGACCCAGTGATTGGGCGCGATGA
TGAAATCCGCCGCACAATTCAAATTCTTTCCCGCCGTACTAAAAATAACCCTGTCTTAATTGGCGAACCTGGTGTCGGTA
AAACCGCGATCGCTGAAGGACTTGCACAACGAATTGTTGCAGGTGATGTCCCGCAATCGCTCAAAGACCGTAAACTCATT
GCCTTAGATATGGGCGCATTAATCGCGGGTGCAAAGTTTCGCGGTGAATTTGAGGAACGTCTTAAAGCCGTACTCAAAGA
AGTTACCGAGTCGCAAGGTAAAATTATTCTCTTCATCGATGAGATTCACACCGTTGTTGGTGCGGGGGCAACGCAAGGCG
CAATGGACGCAGGAAACTTGCTTAAACCAATGCTCGCACGCGGTGAGTTGCGGTGTATCGGTGCGACAACGTTAGATGAA
TACCGCAAATACATTGAAAAAGACGCAGCGTTAGAACGCCGTTTCCAGCAAGTTTATGTCGATCAACCTTCAGTAGAAGA
CACAATTTCGATTTTACGCGGACTCAAAGAGCGCTATGAAGTCCATCACGGGGTAAAAATTTCTGATAGTGCGGTAGTTG
CAGCTGCAACACTGTCGAGTCGTTATATTAGCGATCGCTTCCTACCAGATAAAGCGATTGACTTGGTAGACGAAGCCGCC
GCACGGTTGAAAATGGAAATTACTTCTAAACCCGAAGAACTCGATGAGATTGATCGCAAGATTCTCCAACTCGAAATGGA
GAAACTATCCCTCCAAAAAGAAAGCGATCCAGCTTCTAGAGAACGCTTAGAAAGACTCGAAAAAGAACTTGCAGATCTCA
AAGAACAACAACGCGCCCTCAACGCACAATGGCAGTCTGAAAAAGATGTTATTAATCAAATTCAGGCAATAAAAGAAGAA
ATCGACCGCGTTAACGTCGAGATTCAGCAAGCCGAACGTGACTACGACCTCAACAAAGCAGCAGAGTTGAAGTATGGTAA
GCTAACAGATTTACATCGTCAGCTAGAAGAAGCCGAAACAAAACTCGCACAAACTCAAACGACAGGTCAATCGCTGTTGC
GCGAAGAAGTCACCGAAGCGGATATTGCGGAAATTATCTCGAAGTGGACAGGAATTCCGATTAGCAAGTTGGTGGAATCG
GAAAAAGAGAAACTGCTACATTTAGAAGATGAACTTCACCGGCGCGTGATTGGACAAAACGAAGCAGTAACAGCCGTTGC
GGATGCAATTGCGCGATCGCGTGCAGGATTAGCCGATCCCAATCGTCCAACGGCAAGTTTTATCTTCCTAGGTCCCACAG
GCGTTGGTAAAACTGAACTTGCCAAAGCATTAGCGGCGTATTTATTCGATACCGAAGAAGCAATGGTACGAATCGATATG
TCGGAATACATGGAGAAACACGCGGTTTCGCGCTTAATCGGTGCGCCTCCAGGATATGTCGGTTACGACGAAGGCGGTCA
GTTAACCGAAGCAATTCGCCGTCGTCCTTATGCGGTGGTTCTCTTCGATGAAATCGAAAAAGCCCACCCTGACGTGTTCA
ACGTCATGCTGCAAATTCTCGATGATGGACGTGTTACCGATGCGCAAGGTCATACGGTAGACTTCAAGAACACGATCATT
ATCATGACGAGTAACATCGGTTCGCAGTACATCTTAGATATTGCTGGCGATGACTCGCGTTATGAAGAGATGCGCAGTCG
GGTGATGGATGCTATGCGTAATAGTTTCCGTCCAGAATTTCTTAACCGCATTGATGAAATTATTATCTTCCATGCGCTGC
AAAAACAAGAACTACGCCACATTGTACAACTGCAAGTTCAAAGACTCGAAAAGCGGCTGGCAGAGCGTAAGATGTCGCTG
AAACTCTCTAATGCAGCCCTTGACTTTTTAGCTGAAGTAGGCTACGATCCTGTATTTGGTGCAAGACCGCTAAAACGGGC
GATTCAGCGCGAGTTAGAAACTCAAATTGCTAAATCAATCTTGCGCGGTGAATTCAACGACGGTGACACTATCTATGTCG
ATGTCGAAAACGAACGTCTGGCATTTAAGCGTTTACCCGTTGAATTACTCACAATGTAA

Protein sequence :
MQPTNPNQFTEKAWEAIAHTPDIVKAAQQQQIESEHLMKALLEQDGLASSILTKAGVNVQKVRERAEQFIQRQPKVSGSG
SSVYLGRSLDTLLDRAENYRKELADEYISIEHLLLAYVNDDRFGKSLFQEFGLDEAKLRGIIKQVRGSQRVTDQNPEGKY
ESLEKYGRDLTEAARQGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKLI
ALDMGALIAGAKFRGEFEERLKAVLKEVTESQGKIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERYEVHHGVKISDSAVVAAATLSSRYISDRFLPDKAIDLVDEAA
ARLKMEITSKPEELDEIDRKILQLEMEKLSLQKESDPASRERLERLEKELADLKEQQRALNAQWQSEKDVINQIQAIKEE
IDRVNVEIQQAERDYDLNKAAELKYGKLTDLHRQLEEAETKLAQTQTTGQSLLREEVTEADIAEIISKWTGIPISKLVES
EKEKLLHLEDELHRRVIGQNEAVTAVADAIARSRAGLADPNRPTASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDM
SEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDFKNTII
IMTSNIGSQYILDIAGDDSRYEEMRSRVMDAMRNSFRPEFLNRIDEIIIFHALQKQELRHIVQLQVQRLEKRLAERKMSL
KLSNAALDFLAEVGYDPVFGARPLKRAIQRELETQIAKSILRGEFNDGDTIYVDVENERLAFKRLPVELLTM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 9e-102 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-101 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 7e-102 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glo7428_1360 YP_007127087.1 ATP-dependent chaperone ClpB VFG2084 Protein 5e-107 43
Glo7428_1360 YP_007127087.1 ATP-dependent chaperone ClpB VFG2076 Protein 6e-114 42