Gene Information

Name : Sta7437_1089 (Sta7437_1089)
Accession : YP_007131631.1
Strain : Stanieria cyanosphaera PCC 7437
Genome accession: NC_019748
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1197830 - 1198180 bp
Length : 351 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: cyc:PCC7424_2157 microcompartments protein; PFAM: Microcompartment protein, bacteria; SPTR: Microcompartments protein

DNA sequence : 
ATGCCAGCGCAACAGGCAGTTGGAGCGATCGAAACAAAAGGTTTTCCAGGTATTTTAGCAGCAGCAGATGCGATGGTTAA
AGCTGGTCGAGTTACTCTGGTAGGCTACATTAGAGTTGGTAGTGCGCGCTTTACCGTAAACATTCGTGGTGATGTTTCGG
AAGTTAAAACTGCTATGGATGCTGGAATCGAAGCAGTAAAAAAAACTGAAGGTGCTGCTTTAGAATCTTGGGTGATTATT
CCCCGTCCTCATGAAAACGTAGTTGCAGTTTTACCTATTGATTATAGCGAAGCGGTTGAGCCTTATCGTCAAAGAGTCGA
AGGCAGAGTTCTTCCTATCGCTCGTAGCTAA

Protein sequence : 
MPAQQAVGAIETKGFPGILAAADAMVKAGRVTLVGYIRVGSARFTVNIRGDVSEVKTAMDAGIEAVKKTEGAALESWVII
PRPHENVVAVLPIDYSEAVEPYRQRVEGRVLPIARS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-12 46
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-12 43
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sta7437_1089 YP_007131631.1 microcompartments protein VFG1596 Protein 1e-12 46
Sta7437_1089 YP_007131631.1 microcompartments protein VFG1597 Protein 1e-12 43
Sta7437_1089 YP_007131631.1 microcompartments protein VFG1598 Protein 9e-13 41