Gene Information

Name : Sta7437_0338 (Sta7437_0338)
Accession : YP_007130916.1
Strain : Stanieria cyanosphaera PCC 7437
Genome accession: NC_019748
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 374742 - 375053 bp
Length : 312 bp
Strand : -
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: cyc:PCC7424_1372 microcompartments protein; PFAM: Microcompartment protein, bacteria; SPTR: Microcompartments protein

DNA sequence : 
ATGTCCATTGCAGTAGGAATGATTGAAACCTTGGGTTTCCCAGCAGTAGTAGAAGCTGCTGACGCAATGGTAAAAGCAGC
TCGTGTTACTTTAGTCGGCTACGAAAAAATCGGTACAGGACGAGTAACTGTCATTGTGCGAGGAGATGTTTCTGAAGTAC
AAGCTTCAGTTGCAGCGGGAATTGAAAACGTCAGCAGAGTTAACGGTGGAAAAGTATTGTCTACTCACATTATCGCTCGT
CCTCACGAAAACCTAGAATACGTTCTGCCAATACGCTACACCGAAGAAGTAGAGCAGTTTAGATCCTACTAG

Protein sequence : 
MSIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKIGTGRVTVIVRGDVSEVQASVAAGIENVSRVNGGKVLSTHIIAR
PHENLEYVLPIRYTEEVEQFRSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-16 52
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-15 50
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 9e-16 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sta7437_0338 YP_007130916.1 microcompartments protein VFG1596 Protein 1e-16 52
Sta7437_0338 YP_007130916.1 microcompartments protein VFG1598 Protein 1e-15 50
Sta7437_0338 YP_007130916.1 microcompartments protein VFG1597 Protein 4e-16 48