Gene Information

Name : Cal6303_3260 (Cal6303_3260)
Accession : YP_007138173.1
Strain : Calothrix sp. PCC 6303
Genome accession: NC_019751
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3848556 - 3848867 bp
Length : 312 bp
Strand : -
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: ana:alr0317 carbon dioxide concentrating mechanism protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment prote

DNA sequence : 
ATGCCTCAGGCTGTCGGAGTAATCGAAACTTTAGGATTTCCTGCTGTACTCGCAGCAGCAGATGCAATGGTGAAAGCTGC
TGGAGTCACCATTGTCTACTATGGGATCGCCGAAAGTGGTCGGCTCATAGTTGCCGTGCGAGGTCATGTAGCCGAAGTCA
AACGAGCCGTTGACGCGGGTATAGAAGCTGGCGAAGCAACTTTTGGTGGAGAGGTTATTACCTATTATGTGGTACCCAAT
CCGCCAGAAAATATCGAAACGGTGTTACCGATTCACTTTACCAGTGCATCTGAACCTTTCCGTCTGTTTTAG

Protein sequence : 
MPQAVGVIETLGFPAVLAAADAMVKAAGVTIVYYGIAESGRLIVAVRGHVAEVKRAVDAGIEAGEATFGGEVITYYVVPN
PPENIETVLPIHFTSASEPFRLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-04 43
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-05 42
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal6303_3260 YP_007138173.1 microcompartments protein VFG1596 Protein 9e-05 43
Cal6303_3260 YP_007138173.1 microcompartments protein VFG1598 Protein 8e-06 42
Cal6303_3260 YP_007138173.1 microcompartments protein VFG1597 Protein 1e-05 41