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Name : Cal6303_5291 (Cal6303_5291) Accession : YP_007140149.1 Strain : Calothrix sp. PCC 6303 Genome accession: NC_019751 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : - COG ID : - EC number : 1.1.2.4 Position : 6373823 - 6375313 bp Length : 1491 bp Strand : - Note : PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113:IPR004490; KEGG: ava:Ava_2520 glycolate oxidase subunit GlcD; PFAM: FA DNA sequence : ATGCTTACCCTAGAAAAACCACAACAGCGCAACTGGAAACCCATCATCAAAGAGATGGAAGCCGCACTTGGGACTAAAAA CGTTATCCAGCGCCGAGAAGAACTAATTACCTACGAATGCGATGGTTTAAGCAGTTATCGCCACCGTCCCTGTTTAGCTG TACTTCCTCGCACCACCGAACAAGTTGCAGCAGCGGTAAAAATTTGTAACAAGTATGATGTTCCTTTTATTGCGCGGGGT TCGGGTACTGGTTTATCAGGCGGTGCTTTACCCGTAGATGATTGTGTGCTTATAGTCACTTCAATGATGCGGCAAATACT AGACATAGATTACGACAATCAACGTGTATTAGTGCAGCCGGGAGTAATTAATAGTTGGGTCACACAAACAGTTAGTGGTG CCGGATTTTACTACGCTCCCGATCCTTCCAGCCAAATTATTTGTTCTATTGGCGGCAACGTAGCCGAAAATTCGGGTGGA GTACATTGCTTAAAATATGGTGTCACCACAAACCACGTTTTGGGTTTAAAAGTCGTCACAGCAGAAGGAGACATCATTGA TTTAGGTGGAGAAATCCCTGAAATGCCAGGTTACGATTTAACAGGGATTTTTGTCGGTTCAGAAGGTACTTTGGGAATTG CCACAGAAATTACTTTGCGAATTATCAAAAGCGCTGAATCTATTTGTGTATTGTTAGCAGACTTTACCAGCGTTGAAGCC GCAGGGGCAACAGTTTCCGACATCATCAGTGCGGGGATTATTCCTGGAGGAATGGAAATGATGGATAACCTCAGCATCAA CGCAGTGGAAGATGTGGTGAAAACCAATTGTTATCCCCGTGATGCCACAGCAATTTTGCTAGTAGAAATCGATGGGTTGG AAGTAGAAGTTGCCGCAAACAAGAAGCGAGTAATTGAAATTTGTCAGCAAAATGGTGCGCGTGCTGTGACATCAGCGAGT GATGTCGAAACCCGTTTAAAATTGTGGAAAGGTAGAAAAGCGGCTTTTGCCGCAGCTGGACACATGAGTCCAGATTACTA TGTTCAAGATGGTGTAATACCTAGAACCCAATTACCTTATGTTCTTAAAGAAATAGAAAAATTAAGTCAAGAATCTGGCT ACAAAATTGCCAATGTTTTCCATGCAGGTGATGGTAATTTACATCCGCTGATTCTATACAACAACTCCATCCCTGGGGAA CTAGAAAAAGTTGAAGAAGTGGGTGGGGAAATTCTCAAGTTGTGTGTACGGGTTGGTGGTAGTATTTCTGGTGAACATGG TATTGGTGCCGAAAAACGCTGTTATATGGCGGATATGTTTAGTGAAGCCGATTTAGAAACTATGCTATGGGTGCGAGAAG TTTTCAATCCTAAAGGTTTGGCAAACCCCACCAAGATTTTCCCTACACCCCGTACCTGTGGAGAAGCTGCTAGGAACATG AACGTGGATGGGAAAAAGTTTGAAGAAATTAAAGGGGTGGAAAGGTATTAA Protein sequence : MLTLEKPQQRNWKPIIKEMEAALGTKNVIQRREELITYECDGLSSYRHRPCLAVLPRTTEQVAAAVKICNKYDVPFIARG SGTGLSGGALPVDDCVLIVTSMMRQILDIDYDNQRVLVQPGVINSWVTQTVSGAGFYYAPDPSSQIICSIGGNVAENSGG VHCLKYGVTTNHVLGLKVVTAEGDIIDLGGEIPEMPGYDLTGIFVGSEGTLGIATEITLRIIKSAESICVLLADFTSVEA AGATVSDIISAGIIPGGMEMMDNLSINAVEDVVKTNCYPRDATAILLVEIDGLEVEVAANKKRVIEICQQNGARAVTSAS DVETRLKLWKGRKAAFAAAGHMSPDYYVQDGVIPRTQLPYVLKEIEKLSQESGYKIANVFHAGDGNLHPLILYNNSIPGE LEKVEEVGGEILKLCVRVGGSISGEHGIGAEKRCYMADMFSEADLETMLWVREVFNPKGLANPTKIFPTPRTCGEAARNM NVDGKKFEEIKGVERY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 9e-108 | 50 |
