Gene Information

Name : Cri9333_0129 (Cri9333_0129)
Accession : YP_007140639.1
Strain : Crinalium epipsammum PCC 9333
Genome accession: NC_019753
Putative virulence/resistance : Virulence
Product : cyclic nucleotide-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.43
Position : 164005 - 166749 bp
Length : 2745 bp
Strand : -
Note : PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain

DNA sequence :
ATGGCTAGCAGAGAAGATCCCCATGACCCTCAAGCTGCACAAGATCTAAGCTGGATTGAGGAAGTAGAGTTACAGGAGCT
TGCATCTTTAGAGTGGGATGTCCCACCACTTTCCTGGTTAAATCCTGAAGAGCAAGCACAATTCCAAAGTCAAGCCGAAA
CTCGTCGCTACCAATTGGGAGAGAAAATTTGGTCTACAGATAGTTCAGGCGACCAATTTTTTATTCTTTTTGGAAAAGTT
CGTCTGAGGGAAGAAGGAGCCTCTAAGCCTTTAGCTACTTTAGCAGAAGGGGATTGGTTTGGTGATTTACAGGAATTTTC
AGGCTCAATCAAAGCGATCGCTGCTAGCAAAGAAGTAATAGTAGGTCGCTGGGATTCTGCCTTCTGGAGCCATGTTTCAT
CCTCACAGAGGGAACAAAGGGAGCAAAGGGAGCAAAGGGAGCGGAGGGAGCAAAGGGAGCAAAGGGAGCAGAGGGAGCAG
AGGGGCAGAGGGAGCAGAGGTAGCACAGGGAGCAGAGGGGCAGAGGAGGCAGAGGGGCAGAGGGGCAGAGGGGCAGAGGG
GCAGAGGAGGCAGGAGAGGCAGGGGCAGTTAAAGTCTGTACCAACTACTTATGAGTACGCCCCACAGCCAGTATCGGGTT
ATCCTTTTGTTTCTAGCCTTAATACGGGTGCTGCTTGTTTAACAATGGTGGCACAACATTTGCAAATTTCAGGCAAGCTA
GAGTGGGTGCAACGTCAGTTAAGGGGACAACGCCCTAAACATCTGGTGGAAGCTGGCGAAAAGTTGGGGCTACAACTGCG
ACGGTTAAAAACTTCTTGGAGTAACCTGCGACAGCTATCATTTCCAGCTTTGTTGCAATGGCAACAGTCAAGCTGGGTGG
TGGTGTATGGGGTAAGAAAAGATCGCTTGCTGATTGCTAACCCTCTTAACTCTAGTCAAACTTGCGATTGGGTTTCTCGG
TCGAAAGTTGAAGCTGCTTGGAATGGGGAATTGTGGCAAGTAGAACCGATTCAGCAACAGGAGAAATTTAACCTGTCGTG
GTTTTTACCTGCGGTTTGGCGCTATCGGGGGTTGTTATTAGAAGTACTGATCGCGTCTTTGACGTTGCAACTGTTGGGGT
TAACGACACCAGTTATCACTCAGGTAATTATTGACAAGGTGATGGTACAAGAAAGCATTGCCACCTTAGATGTAATGGCG
ATCGCTTTACTTTCCGTTGCTTTTTTTGAGGCTCTTTTGGGCATCTTACGGTTATTCATCTTTACTCATACCGCCCGCCG
CCTTGACTTAAGTTTATCAGCACAGCTATTTCGTCACTTGATGCGCCTACCTCTGGCTTATTTTGAGTCTCGGCGGGTAG
GAGATACAGTTGCACGAGTACAGGAACTAGAAAACATTCGCGAATTTCTCACAGGGACGGCGTTGACTGTGATCTTAGAT
GCCATTTTTACTGTGGTGTATTTGGCACTAATGTTTTACTACAATATCCAACTTACGGGGGTGGCTCTTGCAGTTATTCC
ACTATTTGCAATTCTGACATTGCTGGCTACTCCAATTTTGCGTAACTGGTTGAATGAAAGTTTTAACCGCAGTGCCGATA
GTCAATCTTTTCTAGTAGAGACAGTGACAGGTATTCATGCAGTTAAGGCACATGGGGCAGAAAGAACGACACGCGATCGC
TGGGAAGGTTTATTTGCTCGCTTCATCCGCACCAGCTTCAAAGCCTCAACTACTTCCAATATCAGTAACAATATTGGCGA
CTTTCTCACCAATTTATCTAGCTTACTAATTCTCTACTATGGAGCCAAGCTAGTCATCAATCACCAACTAACAATTGGTC
AGCTAGTTGCCTTTCAAATGCTTTCTGGTAGAGTCACAGGGCCGCTTTTACGTTTATTGCAACTGTGGCAAAACTTGCAA
CAAGTGCTGCTATCTGTAGACCGGATTGGGGATATTCTCAATGTTGCTCCCGAAGCCGAATTGGGAGCGGGTTTAGTTTT
ACCTTCTCTGCAAGGTCAAGTTAATTTCGATCAAGTTTTCTTCCGTTATCACTCGTCCCAAGAAGCAATTTTACGAGGAA
TTTCCTTTACAGTACAACCAGGGATGTTTGTCGGAATTGTTGGTCGTAGCGGTTCTGGTAAAAGCACTCTTTCTAAACTA
TTGCAACGCCTTTATTTAGCTGAATCAGGTCGCATTCTTATTGATGGCTTTGATATAAAAAGTGCGGATTTAGTTTCTTT
ACGGCAACAAATTGGTGTGGTATTACAAGAAGATTTTCTCTTTAATGGTTCTATCCTAGAAAATATCACCCTGGGCAATC
CAGATATTACTGCTGAACAAGTAGTAGAAGCTGCCCGACTAGCAGTAGCCCATGACTTTATCAGTGATATGCCCCAAGGT
TACGAAACTAATGTAGGAGAGCGAGGCACAGCTTTATCCGGTGGACAACGGCAACGCATTTCCCTAGCGCGTTTATTCCT
TTCGCAAGCCCCTATTTTGATTCTTGATGAAGCTACCAGCGCCTTAGATAGCGAGACAGAGCAACAAGTTTTACAGAATA
TACAGCGAATTTCCCAAAACCGCACCGTCTTTTTGATTGCCCATCGTTTTGCTCCACTAAAACGCGCTAACACAATTTTG
GTATTAGAAAAAGGCATTCTTGCTGAACAAGGCACTCACCATGAATTGTTGCAGCAGAAAGGTTTATATTGGTCACTATA
TCAACGTCAGCAGTCCTCAGTTTGA

Protein sequence :
MASREDPHDPQAAQDLSWIEEVELQELASLEWDVPPLSWLNPEEQAQFQSQAETRRYQLGEKIWSTDSSGDQFFILFGKV
RLREEGASKPLATLAEGDWFGDLQEFSGSIKAIAASKEVIVGRWDSAFWSHVSSSQREQREQREQRERREQREQREQREQ
RGRGSRGSTGSRGAEEAEGQRGRGAEGQRRQERQGQLKSVPTTYEYAPQPVSGYPFVSSLNTGAACLTMVAQHLQISGKL
EWVQRQLRGQRPKHLVEAGEKLGLQLRRLKTSWSNLRQLSFPALLQWQQSSWVVVYGVRKDRLLIANPLNSSQTCDWVSR
SKVEAAWNGELWQVEPIQQQEKFNLSWFLPAVWRYRGLLLEVLIASLTLQLLGLTTPVITQVIIDKVMVQESIATLDVMA
IALLSVAFFEALLGILRLFIFTHTARRLDLSLSAQLFRHLMRLPLAYFESRRVGDTVARVQELENIREFLTGTALTVILD
AIFTVVYLALMFYYNIQLTGVALAVIPLFAILTLLATPILRNWLNESFNRSADSQSFLVETVTGIHAVKAHGAERTTRDR
WEGLFARFIRTSFKASTTSNISNNIGDFLTNLSSLLILYYGAKLVINHQLTIGQLVAFQMLSGRVTGPLLRLLQLWQNLQ
QVLLSVDRIGDILNVAPEAELGAGLVLPSLQGQVNFDQVFFRYHSSQEAILRGISFTVQPGMFVGIVGRSGSGKSTLSKL
LQRLYLAESGRILIDGFDIKSADLVSLRQQIGVVLQEDFLFNGSILENITLGNPDITAEQVVEAARLAVAHDFISDMPQG
YETNVGERGTALSGGQRQRISLARLFLSQAPILILDEATSALDSETEQQVLQNIQRISQNRTVFLIAHRFAPLKRANTIL
VLEKGILAEQGTHHELLQQKGLYWSLYQRQQSSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 3e-122 45
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 2e-122 45
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 2e-122 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cri9333_0129 YP_007140639.1 cyclic nucleotide-binding protein VFG1557 Protein 1e-122 45
Cri9333_0129 YP_007140639.1 cyclic nucleotide-binding protein VFG1501 Protein 1e-122 45
Cri9333_0129 YP_007140639.1 cyclic nucleotide-binding protein VFG0907 Protein 1e-122 45
Cri9333_0129 YP_007140639.1 cyclic nucleotide-binding protein VFG1269 Protein 6e-131 44
Cri9333_0129 YP_007140639.1 cyclic nucleotide-binding protein VFG0841 Protein 3e-119 44