Gene Information

Name : Cri9333_3361 (Cri9333_3361)
Accession : YP_007143700.1
Strain : Crinalium epipsammum PCC 9333
Genome accession: NC_019753
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3758115 - 3760742 bp
Length : 2628 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR0035

DNA sequence :
ATGCAACCAACTAATCCTAATCAATTTACCGAAAAAGCCTGGGAAGCGATCGCACGTACCCCAGATGTGGTTAAGCAAGC
GAGTCAGCAACAAATTGAAGCTGAACACCTGATGAAGGCGCTGCTAGAACAAGAAGGACTAGCCAGCAGCATATTTACCA
AAGCTGGTGTAAGTATCCAGCGCGTGCGAGATTTTGCGGAGCAATTTATTCAGCGTAATCCTAAAGTATCAGGTAGTGGC
AGTTCTGTTTATTTAGGGCGTAGTCTTGATGCACTCCTGGATCGGGCTGAAGCGTATCGTAAAGAGTATGGAGATGACTT
CATCTCGATTGAACATCTGATGTTAGCTTATGCCAAAGATGACCGCTTTGGTAAAGCTTTATTCCAGGAATTTAAACTTG
ATGAAGCGAAACTCAAAAATATCATCACCCAAATTCGCGGGAGTCAAAAAGTGACTGACCAAAATCCAGAAGGCAAATAC
GAATCGCTGGAAAAATACGGGCGTGACCTGACACAATATGCCCGTGAAGGTAAACTTGATCCAGTAATTGGGCGAGATGA
TGAGATTCGCCGCACCATCCAAATTCTATCCCGTCGCACTAAGAATAACCCTGTGCTAATTGGAGAACCAGGGGTTGGTA
AAACTGCGATCGCAGAAGGACTCGCACAACGGATTATAAGTGGAGATGTACCGCAATCTTTGCGCGATCGCAAGTTAATT
GCCTTAGATATGGGCGCTTTAATTGCTGGTGCTAAGTTTCGCGGTGAATTTGAAGAACGCTTAAAAGCTGTACTTAAGGA
AATTACCGATTCTCAAGGCAAAATCGTCCTATTTATAGATGAAATTCACACCGTTGTCGGTGCTGGCGCTACTCAAGGTG
CAATGGATGCCAGCAACTTGTTAAAGCCGATGTTAGCGCGGGGTGAATTGCGTTGTATTGGTGCAACAACTTTAGATGAA
TACCGCAAATATATTGAGAAGGATGCAGCTTTAGAGCGTCGCTTCCAACAAGTATTTGTGGATCAGCCAAGCGTCGAAGA
TACGATTTCAATTTTGCGGGGTTTAAAAGAACGCTACGAAGTTCATCACGGGGTAAGGATTTCCGATAATTCCTTAGTAG
CAGCCGCAACTTTATCTACTAGATATATTAGCGATCGCTTCTTACCAGATAAAGCAATTGACTTGGTAGACGAAGCTGCT
GCAAGGTTAAAAATGGAGATTACCTCCAAACCTGAAGAACTTGACGAAATTGACCGGAAGATTTTGCAGCTAGAAATGGA
GCGTTTATCGCTGCAAAAAGAAAGTAATCCCGCTTCCAAAGAACGGTTAGAAAGATTAGAAAAAGAACTCGCTGATTTCA
AGGAAGAACAGCGCACGTTAAACGGTCAATGGCAGTCTGAAAAAGATGTTATCAACAAAATTCAGTCGATAAAAGAAGAA
ATCGACAAAGTTAATATTGAGATCCAACAAGCTGAACGCGATTACGATCTCAATAAAGCAGCAGAACTCAAATACGGTAC
ATTGACCGAACTGCACCGCAAATTAGAAGATGCTGAAAGAAACCTCGCAGAAGCTCAAACCAGTGGTAAATCTCTGTTGC
GAGAAGAAGTTACTGAATCGGATATTGCGGAAATTATCTCTAAATGGACTGGGATTCCAATTAGCAAATTAGTGGCATCT
GAGATAGAAAAACTCTTACATTTAGAAGATGAACTGCACGAACGGGTAGTTGGACAACATGAAGCGGTGACTGCGGTTGC
AGATGCGATTCAAAGATCCCGTGCTGGGTTAGCTGATCCTAATCGTCCCACTGCTAGTTTTATCTTCCTTGGCCCTACAG
GGGTAGGTAAAACAGAACTGGGAAAAGCACTTGCTGCTTACCTGTTCGATACGGAAGACGCTTTAGTGCGGATAGATATG
TCCGAATATATGGAGAAACACGCCGTTTCTAGATTAATTGGTGCGCCTCCAGGGTATGTCGGTTATGAAGAAGGCGGTCA
ACTAACTGAAGCTATCCGTCGTCGTCCTTATTCAGTCATCTTATTTGATGAAATTGAAAAAGCACACCCCGATGTTTTCA
ACGTAATGTTGCAAATTCTTGATGATGGTCGAGTTACAGATTCTCAAGGTCGTACTGTTGACTTTAAGAATACGATTATC
ATTATGACCAGTAATATTGGATCGCAATTTATCTTAGATATTGCTGGTGATGAAACCCGCTATGAAGAAATGCGGAGTCG
GGTGATGGATGCGATGCGGAATAGTTTCCGTCCAGAATTTCTCAACCGAATTGATGAAATTATTATCTTCCACGGTTTGA
GTAAAGCTGAACTGCGGTATATTGTGCAGTTACAGATTAAGCGGTTACAGGAAAGATTGCGCGATCGCAAGATGTCTTTA
AAACTTTCTGAATCTGCCTTAGACTTCTTAGCAGAGGTGGGATATGACCCTGTATATGGTGCGCGTCCACTGAAGCGGGC
GATTCAACGAGAATTAGAAACCCAAATTGCTAAGAGTATCTTACGAGGTGACTTTAACGACGGTGACACCATCTATGTAG
ATGTGGAAAATGAGCGTCTTGCTTTCAAGCGTTTACCCGCAGAGTTACTAACTGCACAATCAAGTTAA

Protein sequence :
MQPTNPNQFTEKAWEAIARTPDVVKQASQQQIEAEHLMKALLEQEGLASSIFTKAGVSIQRVRDFAEQFIQRNPKVSGSG
SSVYLGRSLDALLDRAEAYRKEYGDDFISIEHLMLAYAKDDRFGKALFQEFKLDEAKLKNIITQIRGSQKVTDQNPEGKY
ESLEKYGRDLTQYAREGKLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIISGDVPQSLRDRKLI
ALDMGALIAGAKFRGEFEERLKAVLKEITDSQGKIVLFIDEIHTVVGAGATQGAMDASNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQQVFVDQPSVEDTISILRGLKERYEVHHGVRISDNSLVAAATLSTRYISDRFLPDKAIDLVDEAA
ARLKMEITSKPEELDEIDRKILQLEMERLSLQKESNPASKERLERLEKELADFKEEQRTLNGQWQSEKDVINKIQSIKEE
IDKVNIEIQQAERDYDLNKAAELKYGTLTELHRKLEDAERNLAEAQTSGKSLLREEVTESDIAEIISKWTGIPISKLVAS
EIEKLLHLEDELHERVVGQHEAVTAVADAIQRSRAGLADPNRPTASFIFLGPTGVGKTELGKALAAYLFDTEDALVRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDFKNTII
IMTSNIGSQFILDIAGDETRYEEMRSRVMDAMRNSFRPEFLNRIDEIIIFHGLSKAELRYIVQLQIKRLQERLRDRKMSL
KLSESALDFLAEVGYDPVYGARPLKRAIQRELETQIAKSILRGDFNDGDTIYVDVENERLAFKRLPAELLTAQSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-106 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-104 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-104 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cri9333_3361 YP_007143700.1 ATP-dependent chaperone ClpB VFG2076 Protein 7e-115 42
Cri9333_3361 YP_007143700.1 ATP-dependent chaperone ClpB VFG2084 Protein 5e-107 42