Gene Information

Name : Cylst_3898 (Cylst_3898)
Accession : YP_007148691.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4412893 - 4413237 bp
Length : 345 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
ATGTCAATTGCAGTCGGAATGCTTGAAACGTTAGGCTTTCCAGCAGTGGTGGAAGCCGCTGATGCGATGGTGAAAGCTGC
TCGCGTTACCTTGGTAGGCTACGAAAAAATCGGTAGCGGTCGGGTTACAGTCATCGTTCGAGGTGACGTTTCGGAAGTAC
AAGCTTCCGTGGCCGCAGGTGTGGAATCAGTGAAGCGAGTCAACGGTGGACAGGTGTTGTCTACCCATATCATTGCTCGT
CCTCACGAAAACTTGGAATACGTCCTACCAATTCGTTATACAGAAGATGTAGAACAATTCCGGGAAAATGTGAACGCGAT
TCGTCCTTTCGGTAGAAGACCGTAA

Protein sequence : 
MSIAVGMLETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVAAGVESVKRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEDVEQFRENVNAIRPFGRRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-17 53
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 52
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cylst_3898 YP_007148691.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 2e-17 53
Cylst_3898 YP_007148691.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 4e-16 52
Cylst_3898 YP_007148691.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 1e-16 50