Gene Information

Name : Cylst_3899 (Cylst_3899)
Accession : YP_007148692.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4413330 - 4413638 bp
Length : 309 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
ATGCCAATTGCAGTTGGTATGATTGAAACAAAGGGCTTTCCAGCAGTTGTAGAAGCTGCTGATGCGATGGTGAAAGCTGC
TCGCGTTACCTTGGTAGGCTACGAAAAAATCGGTAGCGCTCGCGTTACCGTGATTGTCCGGGGAGATGTATCTGAGGTGC
AAGCCTCAGTAGCAGCTGGCGTTGAAGCGGCCAGAAGAGTAAATGGTGGTGAAGTGTTATCCACTCACATCATTGCCCGT
CCTCACGAAAACCTCGAATACGTCTTGCCGATTCGTTATACAGAAGCTGTGGAACAGTTCCGCACCTAA

Protein sequence : 
MPIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVAAGVEAARRVNGGEVLSTHIIAR
PHENLEYVLPIRYTEAVEQFRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-19 59
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-17 54
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-17 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cylst_3899 YP_007148692.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 2e-19 59
Cylst_3899 YP_007148692.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 2e-17 54
Cylst_3899 YP_007148692.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 6e-18 52