Gene Information

Name : Cylst_5405 (Cylst_5405)
Accession : YP_007150106.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Unknown
Product : cysteine desulfurase NifS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6093235 - 6094440 bp
Length : 1206 bp
Strand : +
Note : PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS

DNA sequence :
ATGCAAAAGAACTGCATCTATCTCGATAATAATGCCACCACCCAGGTAGACCCAGTAGTTGTAGAGGCAATGCTGCCTTA
CCTGACGGACTTTTACGGTAATCCCTCTAGTATGCATTCCTTTGGCGGACAAGTCGGCAAAGGTGTAAAAACAGCAAGAG
AACAACTTGCAGCCCTCCTGGGAGCCGATGAATCAGAAATTATCTTTACCAGTTGCGGAACTGAGGGAGATAACGCCGCT
ATCCGTGCAGCATTGCTAGCACAGCCAGATAAGAGACATATCATCACCACCCAAGTAGAACACGCAGCGGTGTTGAATGT
CTGCAAACAACTAGAAACCCAAGGTTATAGTGTTACCTATCTTTCGGTGAATGCTCAGGGACAGTTGGATCTAAATGAAT
TAGAAGCCTCCCTGACAGGTAACACCGCCTTGGTGTCGATTATGTATGCGAATAATGAAACTGGTACGGTTTTCCCAATT
GAGCAAATTGGGTTAAGAGTTAAAGAACATGGCGCGATCTTCCATGTCGATGCGGTGCAAGCAGTGGGAAAAATCCCGCT
GAATATGAAGACTAGCACTATTGATATGTTAACTCTGTCTGGTCACAAGCTGCACGCACCCAAAGGTATTGGTGCTTTGT
ATGTGCGACGCGGGGTAAGGTTCCGTCCTTTACTGATTGGGGGACACCAAGAACGGGGACGCCGTGCGGGAACAGAGAAT
GTCCCAGCAATTATTGCTATGGGCAAAGCGGCGGAACTAGAGATGCTACATTTACCCGATGCGACCAAGAGAGAAAGAAA
ATTGCGCGATCGCCTAGAAAAAACTTTACTCGCCGCAATTCCCCACTGCGAAGTTAACGGTGATCCTCAGCACAGACTGC
CAAACACCACCAATATAGGCTTTAAGTATATCGAAGGTGAAGCAATTCTGCTTTCCTTAAATAAGTACGGTATCTGTGCT
TCCTCTGGTTCTGCTTGTACTTCTGGCTCACTGGAACCTTCCCACGTCCTTCGGGCTATGGGCTTACCATACACCACTTT
GCACGGTTCCATTCGCTTCAGCCTGAGTCGCTACACCACAGAAGCTGAGATTGATCAAGTTATCGCCGTCATGCCTGAGA
TTGTTGAACGTTTACGCGCCCTTTCACCCTTCAAAAATGACGAGGCGGGTTGGTTACAACAACAGTCAGTCGTCGCTAGT
CATTAG

Protein sequence :
MQKNCIYLDNNATTQVDPVVVEAMLPYLTDFYGNPSSMHSFGGQVGKGVKTAREQLAALLGADESEIIFTSCGTEGDNAA
IRAALLAQPDKRHIITTQVEHAAVLNVCKQLETQGYSVTYLSVNAQGQLDLNELEASLTGNTALVSIMYANNETGTVFPI
EQIGLRVKEHGAIFHVDAVQAVGKIPLNMKTSTIDMLTLSGHKLHAPKGIGALYVRRGVRFRPLLIGGHQERGRRAGTEN
VPAIIAMGKAAELEMLHLPDATKRERKLRDRLEKTLLAAIPHCEVNGDPQHRLPNTTNIGFKYIEGEAILLSLNKYGICA
SSGSACTSGSLEPSHVLRAMGLPYTTLHGSIRFSLSRYTTEAEIDQVIAVMPEIVERLRALSPFKNDEAGWLQQQSVVAS
H

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 3e-53 43