Gene Information

Name : Cyan10605_3135 (Cyan10605_3135)
Accession : YP_007163230.1
Strain : Cyanobacterium aponinum PCC 10605
Genome accession: NC_019776
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3702977 - 3703330 bp
Length : 354 bp
Strand : -
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: syp:SYNPCC7002_A2613 carbon dioxide concentrating mechanism protein; PFAM: Microcompartment protein, bacteria; SPTR: Carbon dioxide

DNA sequence : 
ATGCCTTCCCAATCAGCAGTTGGATCTCTTGAAACCAAAGGATTTCCCGGAGTTTTAGCCGCCGCCGATGCTATGGTTAA
AGCAGGAAGAGTAACCCTTGTTGGTTATATTCGTGTAGGTAGCGCCCGTTTTACCGTCAATATTAGAGGAGATGTCTCTG
AGGTTAAAACCGCTATGGCTGCTGGTATTGATGCAGTTGAAAAGGCTGAAGGTGCAGCTCTTGAGTCTTGGGTTATTATT
CCTCGTCCTCATGAGAATGTTTGTGCTGTGCTTCCTATTGACTATAGTGAATCTGTTGAGCCTTACCGTCAAGCTGTAGA
AGGTATTGCTTTGCCCAGTGCGAGAAATAGCTAA

Protein sequence : 
MPSQSAVGSLETKGFPGVLAAADAMVKAGRVTLVGYIRVGSARFTVNIRGDVSEVKTAMAAGIDAVEKAEGAALESWVII
PRPHENVCAVLPIDYSESVEPYRQAVEGIALPSARNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-10 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan10605_3135 YP_007163230.1 microcompartments protein VFG1596 Protein 2e-10 42