Gene Information

Name : Cyast_0141 (Cyast_0141)
Accession : YP_007163773.1
Strain : Cyanobacterium stanieri PCC 7202
Genome accession: NC_019778
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 150019 - 150375 bp
Length : 357 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR020808:IPR000249; KEGG: syp:SYNPCC7002_A2613 carbon dioxide concentrating mechanism protein; PFAM: microcompartments protein; SPTR: Carbon dioxid

DNA sequence : 
ATGCCTTCACAGTCAGCAGTTGGCTCTATTGAAACAAAAGGATTTCCCGGTATTTTGGCGGCGGCAGATGCCATGGTTAA
AGCTGGTAGAGTTACCCTTGTGGGTTATATCAGGGTTGGTAGCGCCCGTTTTACCGTTAATATTCGTGGTGATGTCTCGG
AGGTCAAAACTGCAATGGCGGCGGGTATTGATGCGGTGAAGAAAGCTGAGGGTGCAACTTTGGAGTCTTGGGTGATTATC
CCTCGTCCCCATCAAAATGTCTGTGCTGTATTACCTATCGATTATACTGATGAGGTGGAATCTTATCGTCAAGCGGTGGA
AGGAAATACTGCCCCCTATCTTACTTCTCAGTCTTAG

Protein sequence : 
MPSQSAVGSIETKGFPGILAAADAMVKAGRVTLVGYIRVGSARFTVNIRGDVSEVKTAMAAGIDAVKKAEGATLESWVII
PRPHQNVCAVLPIDYTDEVESYRQAVEGNTAPYLTSQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-11 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyast_0141 YP_007163773.1 microcompartments protein VFG1596 Protein 2e-11 43