Gene Information

Name : Cyast_0223 (Cyast_0223)
Accession : YP_007163854.1
Strain : Cyanobacterium stanieri PCC 7202
Genome accession: NC_019778
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 236249 - 236560 bp
Length : 312 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR020808:IPR000249; KEGG: mar:MAE_47940 carbon dioxide concentrating mechanism protein; PFAM: microcompartments protein; SPTR: Carbon dioxide conce

DNA sequence : 
ATGTCAATTGCAGTAGGAATGATTGAAACCCTAGGGTTTCCCGCAGTAGTAGAAGCTGCTGATGCCATGGTGAAGGCCGC
TCGTGTAACCCTTGTGGGTTATGAAAAAATCGGTAGTGGTCGTGTAACCGTAATTATTAGAGGAGACGTATCCGAGGTAC
AGGCTTCTGTAGCCGCTGGGATTGAAAGAGCCAATAGTGTAAATGGTGGAGAAGTATTATCTACCCATATTATTGCTCGT
CCCCACGAAAACCTCGAATATGTCCTACCCATTCGCTATACCGAAGAAGTAGAGCAATTCCGTACTTACTAA

Protein sequence : 
MSIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIIRGDVSEVQASVAAGIERANSVNGGEVLSTHIIAR
PHENLEYVLPIRYTEEVEQFRTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-16 53
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-16 53
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyast_0223 YP_007163854.1 microcompartments protein VFG1596 Protein 2e-16 53
Cyast_0223 YP_007163854.1 microcompartments protein VFG1598 Protein 4e-16 53
Cyast_0223 YP_007163854.1 microcompartments protein VFG1597 Protein 4e-16 49