Gene Information

Name : Cyast_0224 (Cyast_0224)
Accession : YP_007163855.1
Strain : Cyanobacterium stanieri PCC 7202
Genome accession: NC_019778
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 236644 - 236955 bp
Length : 312 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR020808:IPR000249; KEGG: mar:MAE_47940 carbon dioxide concentrating mechanism protein; PFAM: microcompartments protein; SPTR: Carbon dioxide conce

DNA sequence : 
ATGTCAATTGCAGTAGGAATGATCGAAACCTTGGGTTTCCCCGCAGTAGTAGAAGCCGCTGACTCCATGGTAAAAGCTGC
CCGTGTAACCCTTGTGGGTTACGAAAAAATCGGTAGTGGTCGTGTAACCGTTATCGTTAGAGGAGACGTATCCGAAGTAC
AAGCCTCTATCGCTGCAGGTATCGAAGGTGCGAACAGAGTAAACGGTGGTCAGGTATTATCCACCCACATCATTGCTCGT
CCCCACGAAAACCTCGAGTATGTACTACCTATCCGTTACACCGAGGAAGTTGAGCAGTTCCGTAGTTATTAA

Protein sequence : 
MSIAVGMIETLGFPAVVEAADSMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASIAAGIEGANRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEEVEQFRSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-17 52
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 6e-16 50
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyast_0224 YP_007163855.1 microcompartments protein VFG1596 Protein 3e-17 52
Cyast_0224 YP_007163855.1 microcompartments protein VFG1598 Protein 2e-16 50
Cyast_0224 YP_007163855.1 microcompartments protein VFG1597 Protein 7e-17 48