Gene Information

Name : Cyast_0553 (Cyast_0553)
Accession : YP_007164180.1
Strain : Cyanobacterium stanieri PCC 7202
Genome accession: NC_019778
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 620470 - 621204 bp
Length : 735 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: cyn:Cyan7425_4191 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC tra

DNA sequence : 
ATGGATAATAAAGATTCTAGTTTAGATAATTGTTTAATTAAGTTAGAAAATATTTATAAAATTTATGGCAGTGGTAACAC
CGAAGTGGTTGCCCTGTCAGCGGTGAATCTTATCATTGAGTCAGGGGAATATTGTTCTATTATGGGAACCTCTGGCTCTG
GAAAATCCACCATGATGAATATTCTAGGTTGTTTGGATCGACCGACTAGGGGAGAATACTATTTGAATGGGGATAACGTA
GCTTCTTTGTCTTCTCGACAGTTGGCAGTAATTCGTAATCAAAAAATTGGTTTTGTTTTCCAACAGTTTCACCTTTTACC
CCAACTAAGTGCTTTAGACAATGTCATCCTACCCATGAAGTATGCAGGAGTAACCACAGAACAACAAAGAGCTAGAGCCG
TAGAAGCCCTAACCAAGGTAGGCTTAGAAAATCGTCTGTACAATCGCCCTAATCAGCTTTCGGGAGGACAACAACAGCGA
GTGGCGATCGCCCGTGCCATTGTCAATAAACCCTTAATTCTCCTTGCGGACGAACCCACAGGGGCATTAGATTCAGAAAC
CACCAAAGAGGTGATGAAAATATTTGCCGACCTAAACCAAGAAGGAATGACCATTATCCTTGTCACCCACGAACATGAAG
TAGCCCAACTAACCCATCGAATCATTCAGTTTTCCGATGGTAAAATCATCCAGAACAATCAAAGGACTCTTTCCCTAAAT
CATAAACCCCTTTAA

Protein sequence : 
MDNKDSSLDNCLIKLENIYKIYGSGNTEVVALSAVNLIIESGEYCSIMGTSGSGKSTMMNILGCLDRPTRGEYYLNGDNV
ASLSSRQLAVIRNQKIGFVFQQFHLLPQLSALDNVILPMKYAGVTTEQQRARAVEALTKVGLENRLYNRPNQLSGGQQQR
VAIARAIVNKPLILLADEPTGALDSETTKEVMKIFADLNQEGMTIILVTHEHEVAQLTHRIIQFSDGKIIQNNQRTLSLN
HKPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyast_0553 YP_007164180.1 ABC transporter NC_012469.1.7686878. Protein 2e-56 56
Cyast_0553 YP_007164180.1 ABC transporter NC_008702.1.4606598. Protein 6e-47 48
Cyast_0553 YP_007164180.1 ABC transporter NC_012469.1.7685735. Protein 3e-38 45
Cyast_0553 YP_007164180.1 ABC transporter CP001581.1.gene598.p Protein 2e-40 44
Cyast_0553 YP_007164180.1 ABC transporter CP001581.1.gene798.p Protein 3e-40 42
Cyast_0553 YP_007164180.1 ABC transporter NC_012469.1.7686946. Protein 4e-31 41