Gene Information

Name : PCC7418_3531 (PCC7418_3531)
Accession : YP_007169856.1
Strain : Halothece sp. PCC 7418
Genome accession: NC_019779
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3824726 - 3825031 bp
Length : 306 bp
Strand : +
Note : PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: cyh:Cyan8802_1621 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein

DNA sequence : 
ATGCCAATTGCGGTTGGAATGATAGAAACGCTAGGCTTTCCCGCCGTCGTGGAAGCAGCCGATGCGATGGTCAAAGCAGC
CCGTGTGACCTTAGTGGGCTATGAAAAAATTGGAACGGGTCGTGTTACCGTGATTGTTCGTGGTGACGTTTCCGAAGTCC
AGGCTTCAGTCAGTGCTGGAGTTGACTCTGCAAACCGAGTCAATGGCGGGGAAGTGTTATCAACGCACATTATTGCTCGT
CCGCACGAAAACTTAGAATACGTCCTACCGATTCGCTACACCGAAGCCGTAGAACAGTTCCGATAA

Protein sequence : 
MPIAVGMIETLGFPAVVEAADAMVKAARVTLVGYEKIGTGRVTVIVRGDVSEVQASVSAGVDSANRVNGGEVLSTHIIAR
PHENLEYVLPIRYTEAVEQFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-17 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-16 53
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-16 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7418_3531 YP_007169856.1 microcompartments protein VFG1596 Protein 1e-17 54
PCC7418_3531 YP_007169856.1 microcompartments protein VFG1598 Protein 2e-16 53
PCC7418_3531 YP_007169856.1 microcompartments protein VFG1597 Protein 4e-17 51