|
Name : Dacsa_0055 (Dacsa_0055) Accession : YP_007170233.1 Strain : Dactylococcopsis salina PCC 8305 Genome accession: NC_019780 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : - COG ID : - EC number : - Position : 55048 - 56532 bp Length : 1485 bp Strand : - Note : PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD DNA sequence : ATGTTCTTAAAAAGCGTTTTCAAAGCTGCCTCAAAAGACCAATGGCGACCAATTATCAAAGCCTTTACGGAAGTTGTCGG AAAAGATGGCGTTGTTCGACGTAAAGATGAGCTTCTCACCTACGAATGCGACGGTTTAGCCAGTTATCGTCAACGTCCGG CGGTGGTGGTTTTGCCTCGTAGCACGGAAGAAGTCGCTGCTGTGGTTCAACTCTGTAACCAATATAACTTAAAATGGGTG GCAAGAGGCGCTGGAACAGGGTTATCTGGGGGAGCATTACCCTTAGAGGATGGGGTGTTGATTGTTACCGCACGGATGAA CGAAATTTTAGAAACTGATCTCTCTAACCAGCGAGTGGTGGTACAGCCTGGAGTAATTAATAATTGGGTGACACAAGCAG TTAGTGGTAAAGGCTTCTATTATGCCCCTGATCCCTCTAGTCAGATTATCTGCTCGATCGGGGGGAATATAGCAGAAAAT TCTGGCGGTGTTCATTGTTTGAAGTATGGCGTGACCACGAACCATGTCCTCGCCCTCAAAATTGTCACCGCAGACGGCTC GATCGTCGATGTGGGGTCTCAAGTCCCAGAAATGCCAGGATATGACCTCACGGGCTTATTTGTGGGGTCTGAGGGGACAT TAGGTATTGCTACTGAAATCACCCTCCGCATTTTGAAAGCTCCCGAATCAGTAGCCGTGCTTCTCGCTGATTTTACCACG ATCGAAGCGGCGGGAAATGCAGTCGCCGCGATTATTGGCGATGGCATCATTCCAGGTGGCATGGAAATCATGGATAACCT CACCATCAATGCGGTAGAAGATGTGGTGGGTGCGGGTTGCTATCCCCGTGATGCAGGGGCAATTTTATTAGTAGAATTAG ACGGGTTAGAAGTGGAAGTAACCCACAACATTCAGCGCACAGCAGAGATTTGTCGGGAAAATGGCGCACGAGAAACAACG ATCGCCACTGATGCCGAAAAACGAGCTAAATTATGGAAAGGACGTAAAGCCGCTTTTGCTGCGGCGGGACATTTAAGCCC CGATTATTTTGTCCAAGATGGAGTCATTCCCCGTACCCAATTAGCCGCCGTGTTACGGGATATCGAAGCCTTAAGCCAGG AGTATGGTTATCCCATTGCTAATGTCTTTCATGCAGGAGACGGTAATTTGCATCCCTTGATTTTATATGATGAATCCGTC GCAGGAGCATTGGAAACAGTAGAAGAAATCGGCGGCAAAATCCTAAAACGCTGTGTGGAAGCGGGAGGAAGTATCTCTGG CGAACATGGCATTGGTGCGGATAAAAATTGTTATATGAGCGAGATGTTTAGCGCGGTGGATATGGAAACCATGCAATATG TTCGCACCGCATTTAATCCCAAAGGGTTGGCAAACCCAACCAAGTTATTTCCGACTCCTCGCACTTGTGGAGAAGCTGCT AATGCTCAAAAAACGGCTCAATGGAAGGGGGCGCAACTTTATTAA Protein sequence : MFLKSVFKAASKDQWRPIIKAFTEVVGKDGVVRRKDELLTYECDGLASYRQRPAVVVLPRSTEEVAAVVQLCNQYNLKWV ARGAGTGLSGGALPLEDGVLIVTARMNEILETDLSNQRVVVQPGVINNWVTQAVSGKGFYYAPDPSSQIICSIGGNIAEN SGGVHCLKYGVTTNHVLALKIVTADGSIVDVGSQVPEMPGYDLTGLFVGSEGTLGIATEITLRILKAPESVAVLLADFTT IEAAGNAVAAIIGDGIIPGGMEIMDNLTINAVEDVVGAGCYPRDAGAILLVELDGLEVEVTHNIQRTAEICRENGARETT IATDAEKRAKLWKGRKAAFAAAGHLSPDYFVQDGVIPRTQLAAVLRDIEALSQEYGYPIANVFHAGDGNLHPLILYDESV AGALETVEEIGGKILKRCVEAGGSISGEHGIGADKNCYMSEMFSAVDMETMQYVRTAFNPKGLANPTKLFPTPRTCGEAA NAQKTAQWKGAQLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 7e-103 | 52 |
