Gene Information

Name : Dacsa_0953 (Dacsa_0953)
Accession : YP_007171039.1
Strain : Dactylococcopsis salina PCC 8305
Genome accession: NC_019780
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 953370 - 953723 bp
Length : 354 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence : 
ATGTCTCTAGATGCAGTGGGTAGCCTTGAAACCAAAGGGTTTCCTGGAGTTTTAGCCGCCGCCGATGCGATGGTGAAGAC
GGGAAATGTCACCTTAGTGGGTTATATCCGTGCTGGTAGTGCGCGGTTTACAATTATTATTCGTGGTGATGTCTCAGAAG
TGAAAACAGCGATGGATGCTGGGATTAATGCGGTGGATAAAGCATACGGGGCTGCGTTAGAAACTTGGGTGATCATTCCT
CGTCCTCACGAAAATGTAGAATGTGTTTTACCCATTGCTTATAACGAAAATGTAGAACGTTTCCGTCAAAGTACAGAACG
TCCTTTAATTGGTTCTTCCCAAAATCGTAGCTAA

Protein sequence : 
MSLDAVGSLETKGFPGVLAAADAMVKTGNVTLVGYIRAGSARFTIIIRGDVSEVKTAMDAGINAVDKAYGAALETWVIIP
RPHENVECVLPIAYNENVERFRQSTERPLIGSSQNRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-11 42
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-12 41
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 8e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dacsa_0953 YP_007171039.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 1e-11 42
Dacsa_0953 YP_007171039.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 2e-12 41
Dacsa_0953 YP_007171039.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 3e-12 41