Gene Information

Name : CKCE_0001 (CKCE_0001)
Accession : -
Strain : Candidatus Kinetoplastibacterium crithidii
Genome accession: NC_019815
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 319 - 1842 bp
Length : 1524 bp
Strand : +
Note : identified by sequence similarity; putative

DNA sequence :
AGAGTTTGATCCTGGCTCAGATTGAACGCTAGCGGAATGCTTTACACATGCAAGTCGAACGGCAGCACGAACTTCGGTTT
GGTGGCGAGTGGCGGACGGGTGAGTAATATATCGGAACGTGCCCAGTAGAGGGGGATAACTACGCGAAAGCGTGGCTAAT
ACCGCATATTCCCTAAGGGGGAAAGCGGGGGATCTTCGGACCTCGCGCTATTGGATCGGCCGATATCGGATTAGCTAGTT
GGTGAGGTAATGGCTCACCAAGGCGACGATCCGTAGCTGGTCTGAGAGGACGACCAGCCACACTGGGACTGAGACACGGC
CCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGAAACCCTGATCCAGCCATTCCGCGTGTGCGATG
AAGGCCTTAGGGTTGTAAAGCACTTTTGGCAGGGAAGAAATAGCATTGGCTAATATCTGATGTGAATGACGGTACCTGCA
GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAA
AGAGTGCGCAGGCGGTTCGGAAAGAAAGATGTGAAATCCCAGGGCTTAACCTTGGAACTGCATTTTTGACTACCGAACTA
GAGTGTACCAGAGGGAGGTAGAATTCCGCATGTAGCAGTGAAATGCGTAGATATGCGGAGGAACACCTATGGCGAAGGCA
GCCTCCTGGGGTAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCT
AAACGATGTCAACTAGCTGTTGGGATCTTCGGATCTTAGTAGCGCAGCTAACGCGTGAAGTTGACCGCCTGGGGAGTACG
GTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGATGTGGATTAATTCGATGCAACGCGA
AAAACCTTACCTACCCTTGACATGTCTAGAATCCCGAAGAGATTTGGGAGTGCTTGCAAAAGAACTAGAACACAGGTGCT
GCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGCTACG
AAAGGGCACTCTAATGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGGGT
AGGGCTTCACACGTCATACAATGGTCGGGACAGAGGGCTGCCAACCCGCGAGGGGGAGCTAATCCCACAAACCCGATCGT
AGTCCGGATCGTAGTCTGCAACTCGACTACGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGTCGCGGTGAATAC
GTTCTCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTTTACCAGAAGTAGTTAGCCTAACCGCAAGGAGG
GCGATTACCACGGTAGGATTCATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTC
CTTT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-116 86.6
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-116 86.6
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-192 85.4
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-192 85.4
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-192 85.2
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-192 85.2