Gene Information

Name : Sinac_1773 (Sinac_1773)
Accession : YP_007201839.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2207847 - 2208167 bp
Length : 321 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
ATGGCGACGGTTCAAAAAAGCAGCCCGCGGAGCAACGGCAGCACGGGCTTCAATGGTGATGCGTTGGGCCTGATCGAGAC
CAAGGGGCTGGTCGGCGTCATCGAGGCGACCGACGCCATGCTCAAGGCGGCCAACGTAACCCTGGTCGGGCGCGTCGGCA
TCGGCGCGGCGTTCATCACGACCCTGGTTCGGGGCGACGTCGGCAGCGTTCGCGCGGCCGTCGAAGCAGGGGCCGAGGCG
GCCAGCCGGGTGGGCGAGCTCGTCAGCGCCCACGTGATTCCCCGACCCGACGAAGCGGTCGTGCGCACCTTCATCGGTTG
A

Protein sequence : 
MATVQKSSPRSNGSTGFNGDALGLIETKGLVGVIEATDAMLKAANVTLVGRVGIGAAFITTLVRGDVGSVRAAVEAGAEA
ASRVGELVSAHVIPRPDEAVVRTFIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-10 58
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-10 57
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-09 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_1773 YP_007201839.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 1e-10 58
Sinac_1773 YP_007201839.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 1e-10 57
Sinac_1773 YP_007201839.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 4e-10 53