Gene Information

Name : Sinac_1774 (Sinac_1774)
Accession : YP_007201840.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2208172 - 2208501 bp
Length : 330 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
ATGGCCGTTGCGACGCTTGAAGCGCTAGGCATGATTGAATGCAAAGGGTTCGTCGCCCTGGTGGAAGCCTGCGACGCGAT
GTTGAAGGCGGCCAACGTGGAGTTGGTGGGCTGGGACAAGATCGGCAGCGGCCTGGTCACCGCCTTCGTGGCGGGTGACG
TCGCCGCCGTGAAAGCCGCCGTCGATGCCGGGGCCGCCGCCGCCAGCCGGATTGGCGAAGTGGTCAGCGTGCAGGTGATC
CCCCGCCCCCACGAAGACCTGAGCGGCATCTTGACCTTCACCAAGGCCGCGGCCCAGGCGCCCGCCAAGTCCAAAAATGA
CGGAGCCTAA

Protein sequence : 
MAVATLEALGMIECKGFVALVEACDAMLKAANVELVGWDKIGSGLVTAFVAGDVAAVKAAVDAGAAAASRIGEVVSVQVI
PRPHEDLSGILTFTKAAAQAPAKSKNDGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-11 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-11 63
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-09 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_1774 YP_007201840.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 2e-11 65
Sinac_1774 YP_007201840.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 3e-11 63
Sinac_1774 YP_007201840.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 7e-10 60