Gene Information

Name : Sinac_2411 (Sinac_2411)
Accession : YP_007202417.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2972441 - 2972965 bp
Length : 525 bp
Strand : -
Note : PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family

DNA sequence : 
ATGCCGTCATTCGAGAGTACCCAACACAAGCTGGACCGCGTCCGTCGTCCCCGCGTCCATCTGACTTATGACGTTGAGGT
CGGTGGTGCGATCCAGGTCAAAGAACTCCCCTTTGTCATGGGCGTTCTGGCTGACCTTTCGGGCAAGCCGATTGAGGCGT
TGCCCAAGATGAAGGACCGCAAATTCGTTGAAATCGACCGTGACAATTTCAACAAGGTCCTCAACGCAATCAAGCCCCGG
TTGGCGTTCCAGGTGGACAACACCCTTCAAAACGACAACTCGAAGTTCAATGTTGAACTTAAGTTCGGTCATATGAATGA
CTTCGAGCCTGAGCAGGTCGTTCGCCAGATTGAGCCGCTTCGCAAACTTCTGGAAGCACGTGACCGGCTCTCCGACCTCG
TGACCAAGATGGACGGTAACGACACGCTCGAGCAACTGCTCCAAGACGTGGTCAACAATACCGATTCGTTGAAGAAATTG
AGCAGTGAGACGGGACGCGCCGAGTCCAAGTCGGAGGAGTCTTGA

Protein sequence : 
MPSFESTQHKLDRVRRPRVHLTYDVEVGGAIQVKELPFVMGVLADLSGKPIEALPKMKDRKFVEIDRDNFNKVLNAIKPR
LAFQVDNTLQNDNSKFNVELKFGHMNDFEPEQVVRQIEPLRKLLEARDRLSDLVTKMDGNDTLEQLLQDVVNNTDSLKKL
SSETGRAESKSEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 5e-32 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_2411 YP_007202417.1 type VI secretion protein VFG2069 Protein 5e-32 45