|
Name : Sinac_2420 (Sinac_2420) Accession : YP_007202426.1 Strain : Singulisphaera acidiphila DSM 18658 Genome accession: NC_019892 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : - COG ID : - EC number : - Position : 2987425 - 2990091 bp Length : 2667 bp Strand : - Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family DNA sequence : ATGGGAGTCGATTCGGGAGCGGTCATCAAGACGCTCAATAAGACATGTGTCAACTCCCTCCAGGCGGCGGCCGGGCTCTG CCTGTCACGCACGAATTACAGTGTTGAGGTCGAGCACTGGCTGCTGAAATTGACTGAGGTGCACGATAGCGACCTGGCCC GGGTCTTCCGCCACTTCGAGGTCAACACGTCGCATCTTCAGCGCGATCTGACCAAGGCACTCGATCGATTGAAGACCGGC AATGCGCGAACGCCGATGCTCTCTCCCTCGATCGACGAGTTGATCCGCTCGGCGTGGGTGCTCGCCTCCCTCCAATATCA GTCACGACAGGTCCGCTCCGGGTTCCTCCTCCTCGCCCTGCTCGAGGATGAACAACTCGGCCGGCTGGCCCGCGACGCGT CGCCGGAGTTCGCCAAGATCAAGGTGGAGACCCTCGCGAGCGGAATGACGAGCCTGATCGCCGGCTCGGCTGAGGAGGAA TCGCCGGCGCGCGAGGCCGAGGGGCAAGCGACGCCTTCCCGTGGTGCGGCAACCCAGACCCCCGCGCTCGATCAATACAC GATCAACTTGACCGAACGGGCGCGGGCAGGCCAGATCGATCCGGTTCTCGGCCGCGATGCCGAGGTCCGTCAGATGGTCG ATATCCTGATTCGCCGTCGCCAGAACAACCCGATCCTGACCGGTGAGGCGGGGGTCGGCAAAACGGCCGTCGTCGAGGGC CTCGCGGCTCGGATCGCGGCGGGCGACGTTCCCGAGCCGCTCCGCAAAGTGGTTCTGAGAACCTTGGACCTCGGCCTGCT CCAGGCGGGAGCCGGGGTCAAGGGGGAGTTTGAGAATCGGCTCAAGCAAGTGATCGCCGAGGTGAAAGCCTCACCCGTGC CGATTGTCCTCTTCATCGACGAAGCACACACCATGATCGGCGCAGGGGGACAGGCCGGTCAGGGGGATGCGGCCAACCTG CTCAAGCCGGCCCTGGCTCGAGGCGAACTCCGTACGATCGCGGCGACCACTTGGGCCGAGTACAAGAAATACTTCGAGAA AGATGCGGCCCTGGCCCGACGATTCCAGGTGATCCGGGTCGAGGAGCCGAGCGAGGAAAAAGCGATCGTGATGATGCGTG GCATTACCGCCATGCTCGAGAGTCATCACGGGGTGCGGATCCTCGATGAGGCCGTAGAGGGATCGGTCAAGCTCTCCGCG CGCTATATCCCCGGCCGACAACTTCCCGACAAGTCGGTGAGCCTCCTCGATACGGCCTGTGCTCGCGTCGCGATCAGCCA GACCGCAATCCCGCCGGCCGTCGAGGATTGCCGCCGCCGGATCGATCACCTCAAGGTCGAAATCGGGATCCTCGAACGCG AAAATGTGACGGGAGTCCAACACGACGCACGGCTCGCCGAGACCCGGGAGGCACTTGCCAAGTCCGAGTCCCTCCTGGTC GAGCTTGAGAAACGGTGGAAAGAGGAACGAACGCTTGTTCAGACCATCCGAGGGCTCGCCGAGCAAATTGAGAAGGCACA TGCCGCCAAGAACGGCAAGGCCGGCGAGCTGCCGACCATCGAGACCCCGGCCCAGCCAGATAAGCTCAAGACCGAACTCG CCACTCGAACCTTGGAGTTAAGCGCCCTCCAAGGCGATTCGCCGCTGATGCACGTGAATGTTGATTCTCAGACGATCGCC GCCGTGATCGCCGGCTGGACCGGGATCCCGGTGGGCAAGATGCTGGCCGATGAGATCAGGACGGTCTTGAACCTCAAGAC GAAGCTGGAAGAACGCGTGATCGGCCAGGCGCAAGCTCTCGAGGCCGTCAGCCAACGCATTCGGACCGCTCGGGCCAATC TGACCGACCCTCGTCGCCCGATCGGTGTCTTCCTCCTGGTCGGACCCAGCGGCGTGGGCAAGACGGAGACCGCGATCTCA CTGGCCGACTCGCTCTATGGCGGCGAGCGGAACCTTGTCGTTATCAATATGTCCGAGTATCAAGAGGCGCATACTGTCTC GGGTCTGAAAGGCTCACCACCCGGTTACGTTGGCTACGGCGAAGGGGGAGTTCTCACCGAGGCTGTCCGGCGCAAGCCTT ACTGCGTGGTCCTGCTCGACGAGGTGGAGAAGGCCCACCCGGACGTGATGGAACTCTTCTTCCAGGTCTTTGATAAGGGG ACGCTCGAGGACGGTGAAGGACGCGTGATCGACTTCAAGAACACGGTCATCCTTCTGACCTCGAATGTCGGGACAGAGAC CACCATGGCGCTCTGTGCCGATGAGGATACCACGCCCGAAGCCGCCGGCCTGGTCGAGGCGCTCCGCCCCGAACTCCTCA AGGTCTTCCCCCCGGCCTTGCTCGGACGCCTGGTCGTCGTCCCTTACTATCCGATCTCCGACGAGGTGATGAAGCAGATC GTCAGGCTCCAACTCGACCGGATCGTCAGGCGGGTTCGCGAGAACCACAAAGCCGCCTTTACCTACAGCGAGGAAATCGT CGCGAACATTGCCAGCCGTTGCAAGGAGGTCCACAGCGGAGCACGCAATGTCGACCAGATCTTGACCCGCAGTCTTCTGC CGGAACTTTCCCAGGAGTTCCTCGCCCGTATGGCCGAGGGCGACGTCCTCACCAGCGTTTATGTGGATGTCGACGAACAA GGGAACTTCCGCTACCAATTCTCCTGA Protein sequence : MGVDSGAVIKTLNKTCVNSLQAAAGLCLSRTNYSVEVEHWLLKLTEVHDSDLARVFRHFEVNTSHLQRDLTKALDRLKTG NARTPMLSPSIDELIRSAWVLASLQYQSRQVRSGFLLLALLEDEQLGRLARDASPEFAKIKVETLASGMTSLIAGSAEEE SPAREAEGQATPSRGAATQTPALDQYTINLTERARAGQIDPVLGRDAEVRQMVDILIRRRQNNPILTGEAGVGKTAVVEG LAARIAAGDVPEPLRKVVLRTLDLGLLQAGAGVKGEFENRLKQVIAEVKASPVPIVLFIDEAHTMIGAGGQAGQGDAANL LKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVIRVEEPSEEKAIVMMRGITAMLESHHGVRILDEAVEGSVKLSA RYIPGRQLPDKSVSLLDTACARVAISQTAIPPAVEDCRRRIDHLKVEIGILERENVTGVQHDARLAETREALAKSESLLV ELEKRWKEERTLVQTIRGLAEQIEKAHAAKNGKAGELPTIETPAQPDKLKTELATRTLELSALQGDSPLMHVNVDSQTIA AVIAGWTGIPVGKMLADEIRTVLNLKTKLEERVIGQAQALEAVSQRIRTARANLTDPRRPIGVFLLVGPSGVGKTETAIS LADSLYGGERNLVVINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRKPYCVVLLDEVEKAHPDVMELFFQVFDKG TLEDGEGRVIDFKNTVILLTSNVGTETTMALCADEDTTPEAAGLVEALRPELLKVFPPALLGRLVVVPYYPISDEVMKQI VRLQLDRIVRRVRENHKAAFTYSEEIVANIASRCKEVHSGARNVDQILTRSLLPELSQEFLARMAEGDVLTSVYVDVDEQ GNFRYQFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-173 | 48 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-139 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-139 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sinac_2420 | YP_007202426.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 0.0 | 55 |
| Sinac_2420 | YP_007202426.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 2e-151 | 45 |
