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Name : glcD [H] (TVNIR_2237) Accession : YP_007217374.1 Strain : Thioalkalivibrio nitratireducens DSM 14787 Genome accession: NC_019902 Putative virulence/resistance : Unknown Product : Glycolate dehydrogenase, subunit GlcD Function : - COG functional category : - COG ID : - EC number : 1.1.99.14 Position : 2270344 - 2271843 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGAACATCCTTTTCGACCAACGTCTGGACGGTCCGCTGCCCCCCGTGGACGCCGCGATCACGCTCGAGCGCCTGCGGGC CGCTCTCCCCGGGATGAGCCTGCTGTACCGTGAGGAGGACCGGCGCCCGTTCGAGTGCGACGGCTTGTCGGCGTACCGCG TGTTGCCGATGCTGGTCGCACTGCCCGAAACGGTCGAGCAGGTCGTGACCCTGTTGCGCACCTGCCGTGAACTCCGCGTG CCGGTGGTGACCCGCGGCGCCGGCACCGGCCTCTCCGGCGGCGCACTGCCGCTGGAACAGGGCGTGCTGCTGGTGATGTC GCGCTTCGACCGAATCCTGGAACTCGACCCCGACGCGCGCATCGCTCGAGTGCAGCCGGGAGTGCGCAATCTCGCGATCT CCGAGGCGGCCGCGCCCCACGGCCTGTACTATGCCCCCGACCCGTCCTCGCAGATCGCGTGTTCGATCGGCGGCAACGTT GCCGAGAATGCCGGCGGCGTGCATTGCCTGAAATACGGGCTGACCGTGCACAATGTGCTTGCGATCGAGGCGATCACCCT GGAAGGAGAACGCCTCACGCTCGGCTCGGCGGCGCTGGATGCGCCGGGCTACGACCTGCTCGCACTGTTCAACGGCTCCG AGGGCATGCTCGGAATCATCACCGAGGTCACGGTGAAACTGCTGCCGCGACCCGAGACTGCGAAGGTGATTCTCGCCAGC TTCGACGACGTCGAAAAGGCCGGCCGCGCGGTCGGTGACATCATCGCGGCGGGCATCATTCCCGGTGGCCTGGAGATGAT GGACAACCTCGCGATCCGCGCAGCCGAGGACTTCATCCATGCCGGCTACCCGGTCGACGCACAGGCGATCCTGCTCTGTG AACTCGACGGGGTCGAGGCCGACGTCGCCGACGACTGCCAGCGAGTGCGCAAGGTCCTGGCGGCGGCGGGAGCGACCGAC ATCGCGCTCGCCTGCGACGAAGCCGAGCGCGCGCGCTTCTGGGCTGGACGCAAGAACGCGTTCCCCGCCGTTGGCCGCCT GGCACCCGACTACTACTGCATGGACGGAACCATTCCCCGGCGTGAACTGCCGAGGGTGCTGAAGGGGATTGCGGCGCTGT CGGCGGAATCCGGCCTACCGGTGGCGAACGTGTTCCATGCTGGCGACGGCAACATGCACCCCCTGATCCTGTTCGATGCC AACCGGCCCGGCGAACTGGAACTCGCGGAGCGCGTCGGCGCACGCATTCTCGAACTCTGCGTCGAGGTCGGCGGCAGCAT CACCGGCGAACACGGCGTCGGGCGCGAGAAGATCAATCAGATGTGCACCCAGTTCCAGCCCGACGAGATCACGGTGTTTC ACGCGGTGAAGGCCGCGTTCGACCCGGACGCGATGCTCAACCCCGGCAAGAACATCCCGACGCTCGCCCGCTGCGCAGAG TACGGCGCGATGCACGTACACAACAATCAACTTCCACACCCGGACCTGCCCCGGTTCTGA Protein sequence : MNILFDQRLDGPLPPVDAAITLERLRAALPGMSLLYREEDRRPFECDGLSAYRVLPMLVALPETVEQVVTLLRTCRELRV PVVTRGAGTGLSGGALPLEQGVLLVMSRFDRILELDPDARIARVQPGVRNLAISEAAAPHGLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNVLAIEAITLEGERLTLGSAALDAPGYDLLALFNGSEGMLGIITEVTVKLLPRPETAKVILAS FDDVEKAGRAVGDIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVDAQAILLCELDGVEADVADDCQRVRKVLAAAGATD IALACDEAERARFWAGRKNAFPAVGRLAPDYYCMDGTIPRRELPRVLKGIAALSAESGLPVANVFHAGDGNMHPLILFDA NRPGELELAERVGARILELCVEVGGSITGEHGVGREKINQMCTQFQPDEITVFHAVKAAFDPDAMLNPGKNIPTLARCAE YGAMHVHNNQLPHPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 9e-176 | 76 |
