|
Name : secD [H] (TVNIR_2252) Accession : YP_007217389.1 Strain : Thioalkalivibrio nitratireducens DSM 14787 Genome accession: NC_019902 Putative virulence/resistance : Unknown Product : Protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2292001 - 2293866 bp Length : 1866 bp Strand : - Note : TC 3.A.5.1.1 DNA sequence : ATGCGCAACACCTATCCTGTCTGGGTCTATGCCCTGATCGCCCTGGCCATCGTCACGGGTGGCCTGTATGCATTGCCGAA CATCTTCCCGGAAGACCCGGCAGTGCAGGTCGCCAATTCCCGGACCGGGGTGGTCGACGAGAACATCGCTTCGATCATCG ATGTGATCCTCGGTGCCCAGGGACTGACGCCGCACCGGATTGAGGAGCCCGATGGGCAGAAGCTGCTGCGGTTCGACAGC GCCGAGCGCCAGTTGCGCGCCGCCGATGTGCTGCGCGGTGCGCTGGACGACGACCATGTCGTGGCGTTGAGCCTTGCCCC GGCGACGCCGGAGTGGCTGCGGGCTATCAATGGCCGGCCGATGTCACTGGGGCTGGATCTGCGTGGTGGTGTGCACTTCC TGATGGAGGTGGATCTGAACGCCGTGATCGGCACGGCGATGGAGCGCTACACGAACGAGTTCCGTGGACGGCTGCGCGAG GAGCGCCTGGCGTTCGATGAGATCGAACGCGGCGCCCGCGACCTGATGATCCGCTTTGCGTCGGAACAGGATCGGGCGCA GGCGCTGACCTGGCTGCGCCGGAATTACCGGGGTGAACTCAACTTCGTCGAACGCGGTCTGGGCGCGGACAGCAGCCTCG AAGTCACGCTGGACGCGGAGCATTTGACCGAACTGCGGCGACTGGCGCTGCAGCAGAACATCTCGACGCTGCGCAAACGG GTGGACGAACTCGGAGTCGCCGAGCCGATCATCGCCCAACAGGGAGAGAGCCGCATCGTGGTGCAGCTTCCCGGGGTGCA GGATACGGCCCGGGCGAAGGAAATCCTCGGTGCCACCGCCACCCTCGAGTTTCGTATGGTCGCGGAGGGTGAGGATGCAC CTGCGGCGGCCGCCTCCGGCCGGGCTCCCGCCGGAACCCGTCTCTATTACGAGCGCGACGGGGCCCCCGTCCTGCTGCAG CGGCGCGTGATGCTGACCGGGGACTACATCACCGGAGCCTCGTCCGGAATTGCGCAGGATACCGGGGGGCCGGCGGTGTT CATCAACCTGGATGGGCAGGGTGCACGGATCTTTTCCCGGGTCACGGCCGAGAACGTCGGGCGGCTGATGGCCACGGTGT TCATCGAGACCCGTACCGAGACCACGGAGGAAGACGGCGAACTGGTACGGCGGACCTCGCGCAGCGAAGAGGTCATCAAC ATCGCCCGCATCAACGAGCCGCTCGGCCGCCGGTTTCAGATCACGGGTCTCGAGAGTACCCGCGAGGCGCATAACCTGGC GTTGCTGCTGCGCGCCGGTGCACTGGCGGCACCGATGTCGATCGTGGAAGAGCGTACGGTCGGACCGAGCCTCGGACAAG AGAACATCGATAGGGGCATGCAGTCGGTGATCATCGGCTTCATCGCGGTGATGCTGTTCATGGTCCTCTACTACCGCGTG TTCGGGCTGATCGCGAACTTCGCGCTGGCTTTGAACCTCGTGTTCATCGTGTCGATCCTGTCGATGCTTCAGGCGACGCT GACGCTTCCGGGAATCGCCGGTATCGTGTTGGTGGTCGGCATTGCGGTGGATGCCAACGTGCTGATTTTTGAGCGAATAC GCGAGGAGCTGCGCAACGGGATGTCGCCGAAGGCGGCGATTTCCGGCGGCTACGAGCGGGCGTTCTCGACCATCGCGGAT GCGAACGTGACCACCCTGATCGCGGCGGTGGTGCTGTTTCTGTTTGGCACCGGCCCAATCAAGGGCTTCGCGATCACGCT TTCGATCGGGGTCGTGGTGTCGATGTTCACCGCGATCGTGGTCACGCGCGCCATCGTCAACCTGACCTACGGTCGCCAGC GGCGCATCACGCGGCTGGCGATCTAG Protein sequence : MRNTYPVWVYALIALAIVTGGLYALPNIFPEDPAVQVANSRTGVVDENIASIIDVILGAQGLTPHRIEEPDGQKLLRFDS AERQLRAADVLRGALDDDHVVALSLAPATPEWLRAINGRPMSLGLDLRGGVHFLMEVDLNAVIGTAMERYTNEFRGRLRE ERLAFDEIERGARDLMIRFASEQDRAQALTWLRRNYRGELNFVERGLGADSSLEVTLDAEHLTELRRLALQQNISTLRKR VDELGVAEPIIAQQGESRIVVQLPGVQDTARAKEILGATATLEFRMVAEGEDAPAAAASGRAPAGTRLYYERDGAPVLLQ RRVMLTGDYITGASSGIAQDTGGPAVFINLDGQGARIFSRVTAENVGRLMATVFIETRTETTEEDGELVRRTSRSEEVIN IARINEPLGRRFQITGLESTREAHNLALLLRAGALAAPMSIVEERTVGPSLGQENIDRGMQSVIIGFIAVMLFMVLYYRV FGLIANFALALNLVFIVSILSMLQATLTLPGIAGIVLVVGIAVDANVLIFERIREELRNGMSPKAAISGGYERAFSTIAD ANVTTLIAAVVLFLFGTGPIKGFAITLSIGVVVSMFTAIVVTRAIVNLTYGRQRRITRLAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-105 | 45 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-105 | 45 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-105 | 45 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-105 | 45 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-105 | 45 |
