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Name : ccmF [H] (TVNIR_0261) Accession : YP_007215453.1 Strain : Thioalkalivibrio nitratireducens DSM 14787 Genome accession: NC_019902 Putative virulence/resistance : Unknown Product : Cytochrome c heme lyase subunit CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 257467 - 259467 bp Length : 2001 bp Strand : + Note : - DNA sequence : ATGATCCCGGAACTGGGTCAGTTCTTGATCGTTCTGGCGCTGGTGCTTGCGCTGGTTCAGGGAATCGGGCCGCTGGTCGG CGCGCATCGCGGCCACGCCAGCCTGATGGCCATTGGCCGACCGTTGGCGCAGGCACAGTTCGTGCTGCTGCTGGCGGCAT TCGCGGCGCTTGCGTGGTCCTTCCTCGCGCACGATTTCTCGGTGAAGAACGTCGCGCAGAATTCGTTCTCGCAGCTTCCT GCCGTGTACCGGTTCACCGCTACCTGGGGGTCCCACGAAGGTTCGCTGCTGCTTTGGACGGTGATTCTCGCGGGCTGGTC GGCGGCCGTCGCGGCATTCTCGAAGCAGCTGCCCGAGGAAATGGTGGCCCGTGTACTGGGTGTGATGGGTCTGATCAGTG TCGGTTTTCTGGCCCTGCTGATCTTCACTTCCAATCCGTTCGAGCGCCTGTTCCCGATTCCGGCCGACGGACGCGACCTG AATCCGCTGCTCCAGGACGTCGGGATGATCTCGCACCCCCCGTTGCTCTACATGGGATACGTGGGGTTCTCGGTCGCGTT CGCGTTCGCGATCGCCGCGCTGCTGGCCGGCAAGCTCGACGCCGCGTGGGCGCGCTGGTCGCGTCCGTGGACCACGACCG CCTGGACGTTCCTCACGCTGGGTGTGGCGCTCGGGAGCTGGTGGGCCTACCGTGAGCTGGGGTGGGGTGGGTGGTGGTTC TGGGATCCGACCGAGAACGCCTCGCTGATGCCCTGGCTGGCCGGCACCGCGCTGATTCACGCGCTGGCGGCTACCGAGAA GCGGGGCGTGTTCAGCAACTGGTCCGTGCTGCTGGCGATCGCGACGTTCTCGTTGTCCCTGCTCGGCACCTTCCTGGTGC GTTCCGGTGTATTGTCGTCGGTGCATGCCTTCGCAACCGACCCGGCCCGGGGCCTGTTCATCCTGGCGTTTCTGGGCCTG GTGATCGGCGGCTCGATGGCGCTGTACGCGCTGCGTGCGCCGCGCATCGTGTCGGGCGGTTCCTTCCACTGGTTCTCGCG CGAATCGCTGTTGCTGGCCAACAACGTGTTCCTGGTGGCCGCCCTCGGCGCGGTCCTGCTGGGTACGCTGTATCCGCTGT TCCTCGATGCGCTTGGGCTGGGCAAGATCTCGGTGGGGCCACCGTATTTCAACGCGGTCTTCGTGCCGTTGGTCGCCCCG GCGCTGTTCCTGGCCGGTCTCGGACCGCTGGCGCGCTGGAAGCAGGCCGATCTTCCGGATCTGATGTGGCGTCTGAAATG GGCGTTTGGGGTGGCACTGGCGACGGCGGCATTGCTGCCGCTGACGCTCAAGGGCATGAACCTGCAGGTGACGCTGGGTA TCTTCCTCGCGCTCTGGATTCTGTTCACCGTGGCGAAGGGTTTTGCGTTGCGCCTGCGCAGTACCCGCAAGGGACGCCTG CAGCAGTTGGCGGGAATGCCGAGGGCGTTCTGGGGAATGCAGATCGCGCATGCCGGACTGGCCCTGCTGGTGGTGGGAGT GACCGTCGTCTCCAACTACGAAACCGAGCGCGACGTGCGCATGCCGATCGGCAGCCACGTCGAGCTGGCCGGATACCGCT TCCAGTTCCAGGGCGTAGAGGAGCTTCCGGGGCCGAATTACGTCGCCGGTCGGGGCACGATGGAGGTCACGAGTCCCTGG GGGCGAAATTTCGTGCTTTATCCCGAAAAGCGCAACTACAATGCGTCGGGCATGATCATGACCCAGGCGGCGGTGAACTA CGGGCCGTTCCGCGACGTGTACGTCTCGCTGGGCGAACCGCTGGGCGACGGCGTCTGGACCGTGCGCGTCTACCACAAGC CTTTCGTCGGCTGGCTTTGGGCCGGCGCCCTGCTGCTCGCGATCGGCGGCGTGCTGGCGGCCGCCGACAGGCGTTACCGC GTCGTAGTCCGGCGCCGCGAGCGGTCGTCGGGAGCGGTGGCACCCGCCGCAGCCGTGCCCCGCGAGGAAGCCGCGACATG A Protein sequence : MIPELGQFLIVLALVLALVQGIGPLVGAHRGHASLMAIGRPLAQAQFVLLLAAFAALAWSFLAHDFSVKNVAQNSFSQLP AVYRFTATWGSHEGSLLLWTVILAGWSAAVAAFSKQLPEEMVARVLGVMGLISVGFLALLIFTSNPFERLFPIPADGRDL NPLLQDVGMISHPPLLYMGYVGFSVAFAFAIAALLAGKLDAAWARWSRPWTTTAWTFLTLGVALGSWWAYRELGWGGWWF WDPTENASLMPWLAGTALIHALAATEKRGVFSNWSVLLAIATFSLSLLGTFLVRSGVLSSVHAFATDPARGLFILAFLGL VIGGSMALYALRAPRIVSGGSFHWFSRESLLLANNVFLVAALGAVLLGTLYPLFLDALGLGKISVGPPYFNAVFVPLVAP ALFLAGLGPLARWKQADLPDLMWRLKWAFGVALATAALLPLTLKGMNLQVTLGIFLALWILFTVAKGFALRLRSTRKGRL QQLAGMPRAFWGMQIAHAGLALLVVGVTVVSNYETERDVRMPIGSHVELAGYRFQFQGVEELPGPNYVAGRGTMEVTSPW GRNFVLYPEKRNYNASGMIMTQAAVNYGPFRDVYVSLGEPLGDGVWTVRVYHKPFVGWLWAGALLLAIGGVLAAADRRYR VVVRRRERSSGAVAPAAAVPREEAAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 3e-127 | 61 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-109 | 55 |
