Gene Information

Name : TVNIR_0265 (TVNIR_0265)
Accession : YP_007215457.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Virulence
Product : Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 261873 - 262643 bp
Length : 771 bp
Strand : +
Note : -

DNA sequence :
ATGTCGCAGCGTGGCACGGTGGTGGTGGACCGGGGTATCCAGTGGTTCCGGTTCACGGCGCCGGCGAATTTTTACGATCT
GGCGGGGCGGATGATTCCGTGGTTTGCCGGGCTGACGGTGATTCTGTTCGTGATCGGGCTGTACCTGGGGCTGGTGGTGG
CGCCGCCGGATTACCAGCAGGGGGACAGTTACCGGATCATTTACATTCACGTGCCGGCGGCGTGGATGTCGATGTTTCTG
TACGTATTGATGGCCGTGTATGCCGGGATCGGGCTGGTGTGGCGGATCAAGATGGCGGAGGTGATGGCGAAGGCGATTGC
GCCGACGGGGGCACTGTTCACGTTCCTGGCGTTGTGGACCGGGGCGTTGTGGGGGCGGCCGACCTGGGGGGTGTACTGGG
TTTGGGATGCGCGCCTGACGTCGGAACTTATTCTGCTGTTTCTGTATCTGGGCTACATGGCGTTGCACGCGGCGATCGAC
GATCGGCAGCGGGCGGCGAACGCGAGTGCGGTGTTGGCGCTGGTGGGTGTGGTGAACGTGCCGATCATTTATTTTTCGGT
GCAGTGGTGGAACACCTTGCACCAGGGGGCGTCGATCACGGTGACCGAGGCGCCGACGATGGCGACGATCATGTTCGTGA
CCTTGCTGATCATGACGCTGGCATGCTGGATGTATTCGATTGCGGTGGTGCTGGCGCGGGCGCGGATCGAGGTGCTCGAG
CGCGAGCGCCGGGCGCGCTGGGTACGGGAACGGCTGGAGGGTGAGACATGA

Protein sequence :
MSQRGTVVVDRGIQWFRFTAPANFYDLAGRMIPWFAGLTVILFVIGLYLGLVVAPPDYQQGDSYRIIYIHVPAAWMSMFL
YVLMAVYAGIGLVWRIKMAEVMAKAIAPTGALFTFLALWTGALWGRPTWGVYWVWDARLTSELILLFLYLGYMALHAAID
DRQRAANASAVLALVGVVNVPIIYFSVQWWNTLHQGASITVTEAPTMATIMFVTLLIMTLACWMYSIAVVLARARIEVLE
RERRARWVRERLEGET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 4e-64 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TVNIR_0265 YP_007215457.1 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE VFG1856 Protein 3e-42 52