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Name : TVNIR_0268 (TVNIR_0268) Accession : YP_007215460.1 Strain : Thioalkalivibrio nitratireducens DSM 14787 Genome accession: NC_019902 Putative virulence/resistance : Unknown Product : Cytochrome c heme lyase subunit CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 263332 - 265353 bp Length : 2022 bp Strand : + Note : - DNA sequence : ATGATTGCCGAGCTTGGACTGTTTGCGCTGATCCTGGCGCTGCTGTTGGCGATCGCCCAGGGCACGCTGCCGCTGATCGG CGCCGCACGCGGCGACGTCGCGCTGATGGCGGTGGGGCGCAGCGCCGCGTTCGGGCAGCTGTTCTTCGTCGCGCTGGCGT ACGCGGCGCTGACCTGGGCCTTTGTCACCGACGACTTCTCGCTGCGCTATGTCGCGACCCACTCCAACTCGCTGCTGCCG ACCCAGTACAAGATCTCCGGGGTCTGGGGCGGACACGAGGGCTCGCTGCTGCTGTGGGTGTTGATCCTGAGCCTGTGGAG CGCGGCGGTCGCGACCTTCAGCCGCAGCCTGCCGCGCGAGGTGCTGGCGCGGGTGCTGGGCGTGATGGGCCTGGTCGCGA TCGGCTTCATCGGCTTCACCTTGTTCACCTCGAGCCCGTTCGAGCGCCTGCTGCCGGCGGCGATGGAAGGGCGCGATCTC AACCCGATGCTGCAGGACCCGGGGCTGATCTTCCACCCGCCGATGCTGTACATGGGCTATGTCGGCTTCTCGGTCGCGTT CGCGTTCGCGATCGCCGCGCTGATCGGCGGCCGGCTCGATGCGGCCTGGGCGCGCTGGTCGCGGCCCTGGACCGCGGTCG CCTGGGCGTTTCTGACGCTCGGCATCGCGCTCGGGAGTTGGTGGGCGTACTACGTGCTCGGCTGGGGCGGCTGGTGGTTC TGGGATCCGGTCGAGAACGCGTCGTTCCTGCCCTGGCTGATGGGTACCGCGCTGCTGCATTCGCTGGCGGTGACCGAGAA GCGCGGCGGGTTCAAGAACTGGACCGTGATGCTCGCGATCCTGACCTTCTCGCTGGTGCTGCTGGGCGCGTTCCTGGTGC GTTCCGGGGTGCTGACCTCGGTGCACGCGTTCGCGGTCGACCCCGACCGCGGGCTGTACCTGCTCGGCTTCATGGCGGTG GTCGTCGCCGGCTCGCTGACGCTGTTCGCCTGGCGCGCGGGCAAGGTCGGTCTCGGCGGCAGCTTCGGGCTGGTCTCGCG CGAGTCGGCGCTGCTGACCAACAACGTGCTGCTGGCGGTGTCCGCAGCGGCGGTGCTGCTGGGCACGCTGTACCCCTTGT TCCTCGACGCGTTCGGTCTGGGCAAGATCTCGGTCGGCCCGCCGTACTTCGAGGCGGTGTTCCTGCCGTTGATGCTGCCG CTGTTGCTGCTGCTCGGGTTCGGCCCGCGGCTGCGCTGGAAGCAGGACAGCCCGACCGAGCAGCTGTGGCGGCTGCGCTG GATCCTCGGGTTCAGCCTGGTGTTCGGGATGCTCTGGCCGCTGGCGGTCGGCAGCTGGTCGCTGCTTGCCGGAATGGGCA CCTTCCTCGGGCTGTGGATCATCGGCTCGGCACTGAAGGACCTGGTCGAGCGCCTGCGCCGGCGCCCGGGCAGCACGCAG GGCTTCGGCACCCGGGTCAAGCGGCTCGGGCGCAGCTACGCCGGCATGCAGATCGCGCACATCGGCGTCGCACTGCTGGT GATCGGCGTCACCTTCGTGCTCGGCTACGACGACGAGCGCGACGTGCGCATGGCGGTGGGCGAGACGGTCGAGGTCGGCG GCTACGCGTTCCGGCTCGATGCGCTGGAACACATCGACGGGCCGAACTACAGCGCCGAACAGGCGACGGTCGCGGTGTAC CGCGACGACGGCCGGCGCCTGGCGACGCTGCGCCCGCAGATGCGCGACTACTTCAGCCAGGACATGCCGATGGCACACAC CTCGCTGCACCGGGGGCTGTTCCGGGACCTGTACGTGAACATGGGAGAGCCGCTGGGCGGGGATGCCTGGGTGATGCGCG TCTACTACAAGCCGTACATGAACTGGATCTGGACCGGCGCGGTGCTGATGGGCCTGGGCGGCTTCCTGGCCGCCACCGAC CGCCGCTACCGCGTGCGCGTGCGCCGCGAGGAGGATCTGCCCGACGACGACACCGACACCGCCGCCAGGCCCCCGGGCAA GCCGTCGGCTGCGTCGGCCTGA Protein sequence : MIAELGLFALILALLLAIAQGTLPLIGAARGDVALMAVGRSAAFGQLFFVALAYAALTWAFVTDDFSLRYVATHSNSLLP TQYKISGVWGGHEGSLLLWVLILSLWSAAVATFSRSLPREVLARVLGVMGLVAIGFIGFTLFTSSPFERLLPAAMEGRDL NPMLQDPGLIFHPPMLYMGYVGFSVAFAFAIAALIGGRLDAAWARWSRPWTAVAWAFLTLGIALGSWWAYYVLGWGGWWF WDPVENASFLPWLMGTALLHSLAVTEKRGGFKNWTVMLAILTFSLVLLGAFLVRSGVLTSVHAFAVDPDRGLYLLGFMAV VVAGSLTLFAWRAGKVGLGGSFGLVSRESALLTNNVLLAVSAAAVLLGTLYPLFLDAFGLGKISVGPPYFEAVFLPLMLP LLLLLGFGPRLRWKQDSPTEQLWRLRWILGFSLVFGMLWPLAVGSWSLLAGMGTFLGLWIIGSALKDLVERLRRRPGSTQ GFGTRVKRLGRSYAGMQIAHIGVALLVIGVTFVLGYDDERDVRMAVGETVEVGGYAFRLDALEHIDGPNYSAEQATVAVY RDDGRRLATLRPQMRDYFSQDMPMAHTSLHRGLFRDLYVNMGEPLGGDAWVMRVYYKPYMNWIWTGAVLMGLGGFLAATD RRYRVRVRREEDLPDDDTDTAARPPGKPSAASA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-139 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-109 | 53 |
