Gene Information

Name : yknY [H] (TVNIR_2756)
Accession : YP_007217875.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Resistance
Product : putative macrolide efflux ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2842727 - 2843404 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence :
GTGGATCCGATCGTACAACTGAGGGGTGTCTCCAAGAGCTACAAGACCGGCGAGGAACGAGTAGCCGCGCTCGAGGATGT
CGACCTTGAGATCGTCCGTAACGAGTACGTCGCGATCATGGGGCCGAGCGGCTCGGGCAAGTCGACGCTGTTGAACCTGA
TGGGCGGAATCGACCGCCCGACCAGCGGGGAGGTCTGGCTCGCCGGCCAGCGCATCGACCAGCTGTCCGAGCGGCAGCTG
CTGGAGGTGCGCCGCCGGCGGGTTGCCTACGTGTTCCAGGATGCCCGGTTGATGCCGTCGCTGACCGCCATCGAAAACGT
GATGCTGCCGCGCGCGTTCAGTGCGCGCAGCCGCGGTGATCGTGCGGCGGCGCTCGAATGCCTCGAACGCGTGGGATTGC
GGAAACGGGCGGAGCACATGGTGCACGAGCTCAGCGGCGGCGAGGCGCAACGGGTTAGTATTGCCCGGACGCTGATGAAG
GAACCCGACCTGATCCTCGCGGACGAGCCCACGGGGAACCTGGACCGGAAGTCGCGCATGGACATCGTGCATCTGTTCGA
GGAGCTGAACTCGATGGGCAACACCATCGTGCTGGTCACGCACGACCAGGAGATCGGTGACCGTACCCGGCGCTGCATCC
GGATCGACGACGGGCGTCCGCTCGAGGAGGCCGCGTGA

Protein sequence :
MDPIVQLRGVSKSYKTGEERVAALEDVDLEIVRNEYVAIMGPSGSGKSTLLNLMGGIDRPTSGEVWLAGQRIDQLSERQL
LEVRRRRVAYVFQDARLMPSLTAIENVMLPRAFSARSRGDRAAALECLERVGLRKRAEHMVHELSGGEAQRVSIARTLMK
EPDLILADEPTGNLDRKSRMDIVHLFEELNSMGNTIVLVTHDQEIGDRTRRCIRIDDGRPLEEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yknY [H] YP_007217875.1 putative macrolide efflux ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 1e-37 47
yknY [H] YP_007217875.1 putative macrolide efflux ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 9e-42 46