Gene Information

Name : TVNIR_2983 (TVNIR_2983)
Accession : YP_007218101.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Virulence
Product : carboxysome shell protein CsoS1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3074510 - 3074833 bp
Length : 324 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCAACGAAACCTACGGCATCGCGCTGGGAATGATCGAGACCCGGGGCCTGGTGCCCGCTATCGAGGCCGCGGACGC
GATGACCAAGGCCGCCGAGGTTCGGCTGATCGCCCGGGAGTTCGTCGGGGGCGGGTACGTCACAGTCCTCGTGCGCGGGG
AAACCGGCGCAGTGAATGCGGCGGTAAGAGCCGGCGCCGATGCCTGCGAGCGTGTGGGCGACGGGCTGGTCGCGGCACAT
ATCATTGCCCGTCCGCATCGGGAAGTGGAGCCGGTGCTCGGCGGGGAAGGCGCCCTGGCCGGTAACCAGCCGCAGCGGAG
CTGA

Protein sequence : 
MANETYGIALGMIETRGLVPAIEAADAMTKAAEVRLIAREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPVLGGEGALAGNQPQRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-11 58
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 53
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-10 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TVNIR_2983 YP_007218101.1 carboxysome shell protein CsoS1 VFG1596 Protein 1e-11 58
TVNIR_2983 YP_007218101.1 carboxysome shell protein CsoS1 VFG1597 Protein 9e-12 53
TVNIR_2983 YP_007218101.1 carboxysome shell protein CsoS1 VFG1598 Protein 5e-11 49